RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 RNF112Q9ULX5 631 aa6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 CDK11AQ9UQ88 783 aaPredicted RBP6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 MMP20O60882 483 aa6.76□□□□□ -1.33
SMARCA5-202ENST00000508573 EGFRP00533 1210 aa6.76□□□□□ -1.33
SMARCA5-202ENST00000508573 HMGB1P09429 215 aaKnown RBP6.76□□□□□ -1.33
SMARCA5-202ENST00000508573 HSP90B1P14625 803 aaKnown RBP6.76□□□□□ -1.33
SMARCA5-202ENST00000508573 NSUN5Q96P11 429 aaKnown RBP6.76□□□□□ -1.33
SMARCA5-202ENST00000508573 COX20Q5RI15 118 aa6.75□□□□□ -1.33
SMARCA5-202ENST00000508573 TMEM130Q8N3G9 435 aa6.75□□□□□ -1.33
SMARCA5-202ENST00000508573 PRIMPOLQ96LW4 560 aa6.75□□□□□ -1.33
SMARCA5-202ENST00000508573 RBSNQ9H1K0 784 aa6.75□□□□□ -1.33
SMARCA5-202ENST00000508573 DZIP1LQ8IYY4 767 aaKnown RBP6.74□□□□□ -1.33
SMARCA5-202ENST00000508573 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
SMARCA5-202ENST00000508573 MTMR7Q9Y216 660 aa6.74□□□□□ -1.33
SMARCA5-202ENST00000508573 KCNMB2Q9Y691 235 aa6.74□□□□□ -1.33
SMARCA5-202ENST00000508573 A6NJR5 290 aa6.73□□□□□ -1.33
SMARCA5-202ENST00000508573 F8W735 103 aaPredicted RBP6.73□□□□□ -1.33
SMARCA5-202ENST00000508573 SSTR4P31391 388 aa6.73□□□□□ -1.33
SMARCA5-202ENST00000508573 KRTAP1-3Q8IUG1 177 aa6.73□□□□□ -1.33
SMARCA5-202ENST00000508573 PUS7Q96PZ0 661 aaKnown RBP6.73□□□□□ -1.33
SMARCA5-202ENST00000508573 PCMTD2Q9NV79 361 aa6.73□□□□□ -1.33
SMARCA5-202ENST00000508573 FSTP19883 344 aa6.72□□□□□ -1.33
SMARCA5-202ENST00000508573 FKBP5Q13451 457 aaPredicted RBP6.72□□□□□ -1.33
SMARCA5-202ENST00000508573 SETDB1Q15047 1291 aa6.72□□□□□ -1.33
SMARCA5-202ENST00000508573 AGGF1Q8N302 714 aaeCLIP6.72□□□□□ -1.33
SMARCA5-202ENST00000508573 ZNF428Q96B54 188 aa6.72□□□□□ -1.33
SMARCA5-202ENST00000508573 CHMP4AQ9BY43 222 aa6.72□□□□□ -1.33
SMARCA5-202ENST00000508573 ZNF777Q9ULD5 760 aaPredicted RBP6.72□□□□□ -1.33
SMARCA5-202ENST00000508573 TRIM33Q9UPN9 1127 aa6.72□□□□□ -1.33
SMARCA5-202ENST00000508573 BRD2P25440 801 aaKnown RBP6.71□□□□□ -1.34
SMARCA5-202ENST00000508573 CFAP70Q5T0N1 1121 aa6.71□□□□□ -1.34
SMARCA5-202ENST00000508573 SLC51AQ86UW1 340 aa6.71□□□□□ -1.34
SMARCA5-202ENST00000508573 NLRP13Q86W25 1043 aa6.71□□□□□ -1.34
SMARCA5-202ENST00000508573 TRAIPQ9BWF2 469 aa6.71□□□□□ -1.34
SMARCA5-202ENST00000508573 SAP130Q9H0E3 1048 aa6.71□□□□□ -1.34
SMARCA5-202ENST00000508573 NOVA2Q9UNW9 492 aaKnown RBP6.71□□□□□ -1.34
SMARCA5-202ENST00000508573 PPME1Q9Y570 386 aa6.71□□□□□ -1.34
SMARCA5-202ENST00000508573 LINC01387J3KSC0 135 aa6.7□□□□□ -1.34
SMARCA5-202ENST00000508573 PRMT3O60678 531 aa6.7□□□□□ -1.34
SMARCA5-202ENST00000508573 GLB1P16278 677 aa6.7□□□□□ -1.34
SMARCA5-202ENST00000508573 ETFBKMTQ8IXQ9 262 aa6.7□□□□□ -1.34
SMARCA5-202ENST00000508573 CCDC82Q8N4S0 544 aa6.7□□□□□ -1.34
SMARCA5-202ENST00000508573 UBAP1LF5GYI3 381 aa6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 PTCD1O75127 700 aaKnown RBP6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 CDC25BP30305 580 aa6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 SOX18P35713 384 aa6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 MAP4K3Q8IVH8 894 aa6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 DCAF11Q8TEB1 546 aa6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 FOXD4L4Q8WXT5 416 aaPredicted RBP6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 MUC3BQ9H195 1237 aa6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 SRA1Q9HD15 236 aaKnown RBP6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 RAXQ9Y2V3 346 aa6.69□□□□□ -1.34
SMARCA5-202ENST00000508573 RBM25P49756 843 aaKnown RBP6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 NAA30Q147X3 362 aaPredicted RBP6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 CEP135Q66GS9 1140 aa6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 CACTIN-AS1Q8N1I8 211 aa6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 PIK3R5Q8WYR1 880 aa6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 SPACA7Q96KW9 195 aa6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 LACRTQ9GZZ8 138 aa6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 STOML1Q9UBI4 398 aa6.68□□□□□ -1.34
SMARCA5-202ENST00000508573 SCNN1AP37088 669 aa6.67□□□□□ -1.34
SMARCA5-202ENST00000508573 COL13A1Q5TAT6 717 aaPredicted RBP6.67□□□□□ -1.34
SMARCA5-202ENST00000508573 TTC39BQ5VTQ0 682 aaPredicted RBP6.67□□□□□ -1.34
SMARCA5-202ENST00000508573 C16orf46Q6P387 395 aa6.67□□□□□ -1.34
SMARCA5-202ENST00000508573 TXNDC11Q6PKC3 985 aa6.67□□□□□ -1.34
SMARCA5-202ENST00000508573 GALNT11Q8NCW6 608 aa6.67□□□□□ -1.34
SMARCA5-202ENST00000508573 IGLV1-40P01703 118 aa6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 HOXD8P13378 290 aaPredicted RBP6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 HYAL2Q12891 473 aa6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 TRIP4Q15650 581 aaPredicted RBP6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 FAM26DQ5JW98 314 aa6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 CAPN12Q6ZSI9 719 aa6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 AEBP1Q8IUX7 1158 aa6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 OR13H1Q8NG92 308 aa6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 MKNK1Q9BUB5 465 aa6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 FAM13BQ9NYF5 915 aa6.66□□□□□ -1.34
SMARCA5-202ENST00000508573 SMNDC1O75940 238 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 MED26O95402 600 aa6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 CDC27P30260 824 aa6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 CD68P34810 354 aaPredicted RBP6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 ATP11AP98196 1134 aa6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 SWI5Q1ZZU3 235 aa6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 MCTP1Q6DN14 999 aa6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 KCNK4Q9NYG8 393 aa6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 FNDC3AQ9Y2H6 1198 aaKnown RBP6.65□□□□□ -1.34
SMARCA5-202ENST00000508573 ACIN1Q9UKV3 1341 aaKnown RBP6.65□□□□□ -1.35
SMARCA5-202ENST00000508573 DHX15O43143 795 aaKnown RBP6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 MFAP1P55081 439 aaKnown RBP6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 OCLNQ16625 522 aa6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 TMCO4Q5TGY1 634 aa6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 Q6ZS46 218 aa6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 ACAD11Q709F0 780 aa6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 GPR152Q8TDT2 470 aa6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 RASSF4Q9H2L5 321 aa6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 SH2B1Q9NRF2 756 aaPredicted RBP6.64□□□□□ -1.35
SMARCA5-202ENST00000508573 GSC2O15499 205 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms