RNA–Protein interactions for RNA: ENST00000505072.5

ATP2C1-209, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 556 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-209ENST00000505072 GPSM2P81274 684 aa15.92■□□□□ 0.14
ATP2C1-209ENST00000505072 TCIRG1Q13488 830 aa15.92■□□□□ 0.14
ATP2C1-209ENST00000505072 PROSER3Q2NL68 480 aa15.92■□□□□ 0.14
ATP2C1-209ENST00000505072 ANGEL2Q5VTE6 544 aaKnown RBP15.92■□□□□ 0.14
ATP2C1-209ENST00000505072 ANXA1P04083 346 aa15.91■□□□□ 0.14
ATP2C1-209ENST00000505072 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-209ENST00000505072 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
ATP2C1-209ENST00000505072 SCARF1Q14162 830 aa15.91■□□□□ 0.14
ATP2C1-209ENST00000505072 CELF1Q92879 486 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-209ENST00000505072 SCN9AQ15858 1988 aa15.91■□□□□ 0.14
ATP2C1-209ENST00000505072 TM4SF4P48230 202 aa15.9■□□□□ 0.14
ATP2C1-209ENST00000505072 SF3B3Q15393 1217 aaKnown RBP15.9■□□□□ 0.14
ATP2C1-209ENST00000505072 COPS6Q7L5N1 327 aa15.9■□□□□ 0.14
ATP2C1-209ENST00000505072 TBC1D16Q8TBP0 767 aa15.9■□□□□ 0.14
ATP2C1-209ENST00000505072 ZNF609O15014 1411 aa15.9■□□□□ 0.14
ATP2C1-209ENST00000505072 PITPNM2Q9BZ72 1349 aa15.9■□□□□ 0.14
ATP2C1-209ENST00000505072 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
ATP2C1-209ENST00000505072 NFE2L2Q16236 605 aa15.89■□□□□ 0.13
ATP2C1-209ENST00000505072 MOB2Q70IA6 237 aa15.89■□□□□ 0.13
ATP2C1-209ENST00000505072 AGBL3Q8NEM8 1001 aa15.89■□□□□ 0.13
ATP2C1-209ENST00000505072 XAGE3Q8WTP9 111 aa15.89■□□□□ 0.13
ATP2C1-209ENST00000505072 CFHR5Q9BXR6 569 aa15.89■□□□□ 0.13
ATP2C1-209ENST00000505072 TSPYL4Q9UJ04 414 aa15.89■□□□□ 0.13
ATP2C1-209ENST00000505072 CENPFP49454 3210 aa15.88■□□□□ 0.13
ATP2C1-209ENST00000505072 FKTNO75072 461 aa15.88■□□□□ 0.13
ATP2C1-209ENST00000505072 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
ATP2C1-209ENST00000505072 ZC3H12CQ9C0D7 883 aaKnown RBP15.88■□□□□ 0.13
ATP2C1-209ENST00000505072 UBE2Q2LH0YL09 131 aa15.87■□□□□ 0.13
ATP2C1-209ENST00000505072 SREBF2Q12772 1141 aa15.87■□□□□ 0.13
ATP2C1-209ENST00000505072 RSBN1LQ6PCB5 846 aaPredicted RBP15.87■□□□□ 0.13
ATP2C1-209ENST00000505072 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
ATP2C1-209ENST00000505072 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
ATP2C1-209ENST00000505072 GMLQ99445 158 aa15.86■□□□□ 0.13
ATP2C1-209ENST00000505072 MYOZ2Q9NPC6 264 aa15.86■□□□□ 0.13
ATP2C1-209ENST00000505072 COL4A1P02462 1669 aa15.86■□□□□ 0.13
ATP2C1-209ENST00000505072 G3V3G9 751 aa15.85■□□□□ 0.13
ATP2C1-209ENST00000505072 USP17L8P0C7I0 530 aa15.85■□□□□ 0.13
ATP2C1-209ENST00000505072 RPS8P62241 208 aaKnown RBP15.85■□□□□ 0.13
ATP2C1-209ENST00000505072 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
ATP2C1-209ENST00000505072 INTS3Q68E01 1043 aaKnown RBP15.85■□□□□ 0.13
ATP2C1-209ENST00000505072 FAM89AQ96GI7 184 aa15.85■□□□□ 0.13
ATP2C1-209ENST00000505072 KIAA0100Q14667 2235 aaKnown RBP15.84■□□□□ 0.13
ATP2C1-209ENST00000505072 FXR1P51114 621 aaKnown RBP eCLIP15.84■□□□□ 0.13
ATP2C1-209ENST00000505072 ZNF428Q96B54 188 aa15.84■□□□□ 0.13
ATP2C1-209ENST00000505072 R3HDMLQ9H3Y0 253 aa15.84■□□□□ 0.13
ATP2C1-209ENST00000505072 BABAM1Q9NWV8 329 aa15.84■□□□□ 0.13
ATP2C1-209ENST00000505072 BRCA2P51587 3418 aa15.83■□□□□ 0.13
ATP2C1-209ENST00000505072 PSME4Q14997 1843 aa15.83■□□□□ 0.12
ATP2C1-209ENST00000505072 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
ATP2C1-209ENST00000505072 UFL1O94874 794 aa15.83■□□□□ 0.12
ATP2C1-209ENST00000505072 TTLL12Q14166 644 aaPredicted RBP15.83■□□□□ 0.12
ATP2C1-209ENST00000505072 ISCA1Q9BUE6 129 aa15.83■□□□□ 0.12
ATP2C1-209ENST00000505072 GGA1Q9UJY5 639 aa15.83■□□□□ 0.12
ATP2C1-209ENST00000505072 SCAF8Q9UPN6 1271 aaKnown RBP15.83■□□□□ 0.12
ATP2C1-209ENST00000505072 MKRN3Q13064 507 aaKnown RBP15.82■□□□□ 0.12
ATP2C1-209ENST00000505072 PRAMEF18Q5VWM3 479 aa15.82■□□□□ 0.12
ATP2C1-209ENST00000505072 ANKIB1Q9P2G1 1089 aa15.82■□□□□ 0.12
ATP2C1-209ENST00000505072 ALDH1A1P00352 501 aa15.81■□□□□ 0.12
ATP2C1-209ENST00000505072 NF2P35240 595 aa15.81■□□□□ 0.12
ATP2C1-209ENST00000505072 PLBD2Q8NHP8 589 aa15.81■□□□□ 0.12
ATP2C1-209ENST00000505072 PNNQ9H307 717 aaKnown RBP15.81■□□□□ 0.12
ATP2C1-209ENST00000505072 TRIM17Q9Y577 477 aa15.81■□□□□ 0.12
ATP2C1-209ENST00000505072 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 USP17L3A6NCW0 530 aa15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 USP17L4A6NCW7 530 aa15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 IRS4O14654 1257 aaPredicted RBP15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 NBPF9Q3BBW0 867 aa15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 OTOP1Q7RTM1 612 aa15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 USP17L1Q7RTZ2 530 aa15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 PODNQ7Z5L7 613 aa15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 RBBP6Q7Z6E9 1792 aaKnown RBP15.8■□□□□ 0.12
ATP2C1-209ENST00000505072 ATP5J2-PTCD1G3V325 749 aa15.79■□□□□ 0.12
ATP2C1-209ENST00000505072 PTPN12Q05209 780 aaKnown RBP15.79■□□□□ 0.12
ATP2C1-209ENST00000505072 RTL5Q5HYW3 569 aaPredicted RBP15.79■□□□□ 0.12
ATP2C1-209ENST00000505072 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
ATP2C1-209ENST00000505072 ANKRD13DQ6ZTN6 518 aa15.79■□□□□ 0.12
ATP2C1-209ENST00000505072 ARMC9Q7Z3E5 817 aa15.79■□□□□ 0.12
ATP2C1-209ENST00000505072 CEP290O15078 2479 aa15.78■□□□□ 0.12
ATP2C1-209ENST00000505072 TRIM28Q13263 835 aaKnown RBP15.78■□□□□ 0.12
ATP2C1-209ENST00000505072 SEC31BQ9NQW1 1179 aa15.78■□□□□ 0.12
ATP2C1-209ENST00000505072 CHPF2Q9P2E5 772 aa15.78■□□□□ 0.12
ATP2C1-209ENST00000505072 WNT10BO00744 389 aa15.77■□□□□ 0.12
ATP2C1-209ENST00000505072 INHBEP58166 350 aa15.77■□□□□ 0.12
ATP2C1-209ENST00000505072 LDLRAD1Q5T700 205 aa15.77■□□□□ 0.12
ATP2C1-209ENST00000505072 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
ATP2C1-209ENST00000505072 PTPN22Q9Y2R2 807 aa15.77■□□□□ 0.12
ATP2C1-209ENST00000505072 SZT2Q5T011 3432 aa15.77■□□□□ 0.11
ATP2C1-209ENST00000505072 TRIOBPQ9H2D6 2365 aa15.77■□□□□ 0.11
ATP2C1-209ENST00000505072 XDHP47989 1333 aa15.76■□□□□ 0.11
ATP2C1-209ENST00000505072 MANSC4A6NHS7 340 aaPredicted RBP15.76■□□□□ 0.11
ATP2C1-209ENST00000505072 HSP90B1P14625 803 aaKnown RBP15.76■□□□□ 0.11
ATP2C1-209ENST00000505072 ATP2B4P23634 1241 aa15.76■□□□□ 0.11
ATP2C1-209ENST00000505072 RIPK4P57078 832 aa15.76■□□□□ 0.11
ATP2C1-209ENST00000505072 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
ATP2C1-209ENST00000505072 OGFOD1Q8N543 542 aa15.76■□□□□ 0.11
ATP2C1-209ENST00000505072 ARMC5Q96C12 935 aa15.76■□□□□ 0.11
ATP2C1-209ENST00000505072 EN2P19622 333 aaPredicted RBP15.75■□□□□ 0.11
ATP2C1-209ENST00000505072 ZBTB38Q8NAP3 1195 aaPredicted RBP15.75■□□□□ 0.11
ATP2C1-209ENST00000505072 ERO1AQ96HE7 468 aa15.75■□□□□ 0.11
ATP2C1-209ENST00000505072 COLQQ9Y215 455 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms