RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 NGLY1Q96IV0 654 aa5.31□□□□□ -1.56
HMGB3P17-201ENST00000504195 TOX2Q96NM4 488 aa5.31□□□□□ -1.56
HMGB3P17-201ENST00000504195 TGFBR3LH3BV60 316 aa5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 GAS2O43903 313 aaKnown RBP5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 PPP1R12BO60237 982 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 SKIP12755 728 aa5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 TARSP26639 723 aaKnown RBP5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 ATP1A2P50993 1020 aa5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 TMEM132AQ24JP5 1023 aa5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 STAG2Q8N3U4 1231 aa5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 GAS2L2Q8NHY3 880 aa5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 ZSCAN18Q8TBC5 510 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 METTL22Q9BUU2 404 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
HMGB3P17-201ENST00000504195 SASH3O75995 380 aa5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 GRNP28799 593 aaKnown RBP5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 NCOA4Q13772 614 aa5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 COL19A1Q14993 1142 aa5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 ANKRD34AQ69YU3 496 aa5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 NFXL1Q6ZNB6 911 aa5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 GALNT11Q8NCW6 608 aa5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 IFT43Q96FT9 208 aa5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P17-201ENST00000504195 LOC102724428A0A0B4J2F2 783 aa5.28□□□□□ -1.56
HMGB3P17-201ENST00000504195 LINC01387J3KSC0 135 aa5.28□□□□□ -1.56
HMGB3P17-201ENST00000504195 J3QW42 95 aa5.28□□□□□ -1.56
HMGB3P17-201ENST00000504195 CYP26A1O43174 497 aa5.28□□□□□ -1.56
HMGB3P17-201ENST00000504195 RXRBP28702 533 aa5.28□□□□□ -1.56
HMGB3P17-201ENST00000504195 SIK1P57059 783 aa5.28□□□□□ -1.56
HMGB3P17-201ENST00000504195 NEUROD2Q15784 382 aa5.28□□□□□ -1.56
HMGB3P17-201ENST00000504195 F13BP05160 661 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 PSAPP07602 524 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 PREPP48147 710 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 RTN1Q16799 776 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 CCDC102BQ68D86 513 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 FAM117BQ6P1L5 589 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 FDX2Q6P4F2 183 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 KIAA1211Q6ZU35 1233 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 TPCN2Q8NHX9 752 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 FAM168AQ92567 244 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 NSUN5Q96P11 429 aaKnown RBP5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 PAK6Q9NQU5 681 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 TLR7Q9NYK1 1049 aaKnown RBP5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 TRIM33Q9UPN9 1127 aa5.27□□□□□ -1.57
HMGB3P17-201ENST00000504195 PIK3CDO00329 1044 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 MAP4P27816 1152 aaKnown RBP5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 ABL2P42684 1182 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 IDH3AP50213 366 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 ARSDP51689 593 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 PLCL1Q15111 1095 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 TXNDC11Q6PKC3 985 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 GDPD2Q9HCC8 539 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 KCNK4Q9NYG8 393 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 JAG2Q9Y219 1238 aa5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 RBM19Q9Y4C8 960 aaKnown RBP5.26□□□□□ -1.57
HMGB3P17-201ENST00000504195 CARMIL2Q6F5E8 1435 aa5.25□□□□□ -1.57
HMGB3P17-201ENST00000504195 LARGE2Q8N3Y3 721 aa5.25□□□□□ -1.57
HMGB3P17-201ENST00000504195 KLHL23Q8NBE8 558 aa5.25□□□□□ -1.57
HMGB3P17-201ENST00000504195 BHLHE22Q8NFJ8 381 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P17-201ENST00000504195 FAM84AQ96KN4 292 aa5.25□□□□□ -1.57
HMGB3P17-201ENST00000504195 C2orf49Q9BVC5 232 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P17-201ENST00000504195 CARD10Q9BWT7 1032 aa5.25□□□□□ -1.57
HMGB3P17-201ENST00000504195 FAM177BA6PVY3 158 aa5.24□□□□□ -1.57
HMGB3P17-201ENST00000504195 ZBTB7BO15156 539 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P17-201ENST00000504195 RAP1GAPP47736 663 aa5.24□□□□□ -1.57
HMGB3P17-201ENST00000504195 UBASH3BQ8TF42 649 aa5.24□□□□□ -1.57
HMGB3P17-201ENST00000504195 TMEM40Q8WWA1 233 aa5.24□□□□□ -1.57
HMGB3P17-201ENST00000504195 RNF208Q9H0X6 261 aa5.24□□□□□ -1.57
HMGB3P17-201ENST00000504195 PALM3A6NDB9 673 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 USP17L5A8MUK1 530 aa5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 CDC25BP30305 580 aa5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 INPP5BP32019 993 aa5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 ZNF792Q3KQV3 632 aa5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 WWC1Q8IX03 1113 aa5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 CHMP7Q8WUX9 453 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 CSRNP1Q96S65 589 aa5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 LMCD1Q9NZU5 365 aa5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 DMGDHQ9UI17 866 aaKnown RBP5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 ATAD2Q6PL18 1390 aa5.23□□□□□ -1.57
HMGB3P17-201ENST00000504195 FSCN2O14926 492 aa5.22□□□□□ -1.57
HMGB3P17-201ENST00000504195 PAOXQ6QHF9 649 aa5.22□□□□□ -1.57
HMGB3P17-201ENST00000504195 ATG4DQ86TL0 474 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P17-201ENST00000504195 PLEKHM2Q8IWE5 1019 aa5.22□□□□□ -1.57
HMGB3P17-201ENST00000504195 LRRC56Q8IYG6 542 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P17-201ENST00000504195 LACRTQ9GZZ8 138 aa5.22□□□□□ -1.57
HMGB3P17-201ENST00000504195 ALG2Q9H553 416 aa5.22□□□□□ -1.57
HMGB3P17-201ENST00000504195 RAPGEFL1Q9UHV5 662 aa5.22□□□□□ -1.57
HMGB3P17-201ENST00000504195 ZSCAN22P10073 491 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 CFPP27918 469 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 CDC27P30260 824 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 SOX18P35713 384 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 NFKBIBQ15653 356 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 SGO2Q562F6 1265 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 SIAH1Q8IUQ4 282 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 SIX5Q8N196 739 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 FOXD4L4Q8WXT5 416 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 COL26A1Q96A83 441 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 RUSC1Q9BVN2 902 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 BCS1LQ9Y276 419 aa5.21□□□□□ -1.58
HMGB3P17-201ENST00000504195 SLC5A6Q9Y289 635 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms