RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 API5Q9BZZ5 524 aaKnown RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 RNF216Q9NWF9 866 aaPredicted RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 POLKQ9UBT6 870 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 SCN7AQ01118 1682 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 ATP8B1O43520 1251 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 DHX16O60231 1041 aaKnown RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 ZSCAN22P10073 491 aaPredicted RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 PTPN14Q15678 1187 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 AMOTQ4VCS5 1084 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 GIMAP6Q6P9H5 292 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 COL3A1P02461 1466 aaPredicted RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 ELP1O95163 1332 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 TNRC6CQ9HCJ0 1690 aaKnown RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 PHKG2P15735 406 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 ELF2Q15723 593 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 HSP90AB2PQ58FF8 381 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 PLA2G4DQ86XP0 818 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 COL23A1Q86Y22 540 aaPredicted RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 ZNF784Q8NCA9 323 aaPredicted RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 MYCBPQ99417 103 aaPredicted RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 GGNBP2Q9H3C7 697 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 ARGLU1Q9NWB6 273 aaPredicted RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 CNPY2Q9Y2B0 182 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 KDM6AO15550 1401 aaPredicted RBP8.32□□□□□ -1.08
EPHA3-203ENST00000494014 PTPRCP08575 1304 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 ZNF75DP51815 510 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 NYAP1Q6ZVC0 841 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 RPAP2Q8IXW5 612 aaPredicted RBP8.32□□□□□ -1.08
EPHA3-203ENST00000494014 IFNL2Q8IZJ0 200 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 TRERF1Q96PN7 1200 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 KCND1Q9NSA2 647 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 BCORQ6W2J9 1755 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 TUBB4AP04350 444 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 PSEN1P49768 467 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 LRMPQ12912 555 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 RRS1Q15050 365 aaKnown RBP8.32□□□□□ -1.08
EPHA3-203ENST00000494014 RTF1Q92541 710 aaKnown RBP8.32□□□□□ -1.08
EPHA3-203ENST00000494014 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 ZNF622Q969S3 477 aaKnown RBP eCLIP8.32□□□□□ -1.08
EPHA3-203ENST00000494014 NCAPGQ9BPX3 1015 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 OSBPL3Q9H4L5 887 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 HDAC5Q9UQL6 1122 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 ATF5Q9Y2D1 282 aaPredicted RBP8.32□□□□□ -1.08
EPHA3-203ENST00000494014 KCPQ6ZWJ8 1503 aa8.32□□□□□ -1.08
EPHA3-203ENST00000494014 MYO1CO00159 1063 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 SOX12O15370 315 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 MAP3K11Q16584 847 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
EPHA3-203ENST00000494014 ANKRD44Q8N8A2 993 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 DDX54Q8TDD1 881 aaKnown RBP8.31□□□□□ -1.08
EPHA3-203ENST00000494014 EYA1Q99502 592 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 ZNF446Q9NWS9 450 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 FHOD1Q9Y613 1164 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 CAVIN2O95810 425 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 TDRD7Q8NHU6 1098 aaKnown RBP8.31□□□□□ -1.08
EPHA3-203ENST00000494014 DCAF5Q96JK2 942 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 TRIM5Q9C035 493 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 ST7Q9NRC1 585 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 TFCP2L1Q9NZI6 479 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 F13A1P00488 732 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 PNMA6AP0CW24 399 aaPredicted RBP8.31□□□□□ -1.08
EPHA3-203ENST00000494014 FOXD4L6Q3SYB3 417 aaPredicted RBP8.31□□□□□ -1.08
EPHA3-203ENST00000494014 FOXD4L3Q6VB84 417 aaPredicted RBP8.31□□□□□ -1.08
EPHA3-203ENST00000494014 FILIP1Q7Z7B0 1213 aa8.31□□□□□ -1.08
EPHA3-203ENST00000494014 PXDNLA1KZ92 1463 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 MYH14Q7Z406 1995 aaKnown RBP8.3□□□□□ -1.08
EPHA3-203ENST00000494014 GUCY2CP25092 1073 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 SYT10Q6XYQ8 523 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 KRBA2Q6ZNG9 492 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 PIGBQ92521 554 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 RGL2O15211 777 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 STX6O43752 255 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 VAMP4O75379 141 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 TYRO3Q06418 890 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 EIF4A2Q14240 407 aaKnown RBP8.3□□□□□ -1.08
EPHA3-203ENST00000494014 CACTINQ8WUQ7 758 aaKnown RBP8.3□□□□□ -1.08
EPHA3-203ENST00000494014 ESYT1Q9BSJ8 1104 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 NUP62CLQ9H1M0 184 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 PSD3Q9NYI0 1048 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 CLIP2Q9UDT6 1046 aa8.3□□□□□ -1.08
EPHA3-203ENST00000494014 A0A1B0GUL7 405 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 FIBPO43427 364 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 PLA2G4AP47712 749 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 TGFB2P61812 414 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 ZSCAN26Q16670 478 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 IQUBQ8NA54 791 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 GOLGA5Q8TBA6 731 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 GTF3C6Q969F1 213 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 AK7Q96M32 723 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 L2HGDHQ9H9P8 463 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 LRRFIP2Q9Y608 721 aaKnown RBP8.29□□□□□ -1.08
EPHA3-203ENST00000494014 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 ATP10DQ9P241 1426 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 LOC102724428A0A0B4J2F2 783 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 APPP05067 770 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 CLCN6P51797 869 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 SIK1P57059 783 aa8.29□□□□□ -1.08
EPHA3-203ENST00000494014 C10orf67Q8IYJ2 551 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms