RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
SSR1-209ENST00000488834 DCTN4Q9UJW0 460 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 MKL2Q9ULH7 1088 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 LOC102724428A0A0B4J2F2 783 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 ZBTB7CA1YPR0 619 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 RNF225M0QZC1 329 aaPredicted RBP7.21□□□□□ -1.26
SSR1-209ENST00000488834 LILRB5O75023 590 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 RGS9O75916 674 aaPredicted RBP7.21□□□□□ -1.26
SSR1-209ENST00000488834 NEFLP07196 543 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 COL8A1P27658 744 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 SIK1P57059 783 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 ECM1Q16610 540 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 XKR5Q6UX68 686 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 SNX29Q8TEQ0 813 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 PMEPA1Q969W9 287 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 CITED4Q96RK1 184 aa7.21□□□□□ -1.26
SSR1-209ENST00000488834 J3QW42 95 aa7.2□□□□□ -1.26
SSR1-209ENST00000488834 TNFRSF21O75509 655 aa7.2□□□□□ -1.26
SSR1-209ENST00000488834 GDF11O95390 407 aa7.2□□□□□ -1.26
SSR1-209ENST00000488834 ALBP02768 609 aa7.2□□□□□ -1.26
SSR1-209ENST00000488834 LINC00114Q6XXX2 140 aa7.2□□□□□ -1.26
SSR1-209ENST00000488834 C1orf127Q8N9H9 656 aa7.2□□□□□ -1.26
SSR1-209ENST00000488834 KANSL3Q9P2N6 904 aa7.2□□□□□ -1.26
SSR1-209ENST00000488834 ZBTB42B2RXF5 422 aa7.19□□□□□ -1.26
SSR1-209ENST00000488834 CYP2E1P05181 493 aaPredicted RBP7.19□□□□□ -1.26
SSR1-209ENST00000488834 PERM1Q5SV97 790 aa7.19□□□□□ -1.26
SSR1-209ENST00000488834 ZSCAN29Q8IWY8 852 aaPredicted RBP7.19□□□□□ -1.26
SSR1-209ENST00000488834 DMRTB1Q96MA1 342 aa7.19□□□□□ -1.26
SSR1-209ENST00000488834 SMG9Q9H0W8 520 aaKnown RBP7.19□□□□□ -1.26
SSR1-209ENST00000488834 GZF1Q9H116 711 aaPredicted RBP7.19□□□□□ -1.26
SSR1-209ENST00000488834 CNTN3Q9P232 1028 aa7.19□□□□□ -1.26
SSR1-209ENST00000488834 FOXD3Q9UJU5 478 aaPredicted RBP7.19□□□□□ -1.26
SSR1-209ENST00000488834 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
SSR1-209ENST00000488834 GNB5O14775 395 aa7.18□□□□□ -1.26
SSR1-209ENST00000488834 DGKGP49619 791 aa7.18□□□□□ -1.26
SSR1-209ENST00000488834 SND1Q7KZF4 910 aaKnown RBP eCLIP7.18□□□□□ -1.264e-8■■■□□ 14.9
SSR1-209ENST00000488834 TMEM151AQ8N4L1 468 aa7.18□□□□□ -1.26
SSR1-209ENST00000488834 PLD4Q96BZ4 506 aa7.18□□□□□ -1.26
SSR1-209ENST00000488834 RBCK1Q9BYM8 510 aa7.18□□□□□ -1.26
SSR1-209ENST00000488834 STARD13Q9Y3M8 1113 aa7.18□□□□□ -1.26
SSR1-209ENST00000488834 SPDYE3A6NKU9 549 aa7.17□□□□□ -1.26
SSR1-209ENST00000488834 FAM177BA6PVY3 158 aa7.17□□□□□ -1.26
SSR1-209ENST00000488834 HOXD8P13378 290 aaPredicted RBP7.17□□□□□ -1.26
SSR1-209ENST00000488834 DCAF5Q96JK2 942 aa7.17□□□□□ -1.26
SSR1-209ENST00000488834 NIF3L1Q9GZT8 377 aa7.17□□□□□ -1.26
SSR1-209ENST00000488834 NOP53Q9NZM5 478 aaKnown RBP7.17□□□□□ -1.26
SSR1-209ENST00000488834 FRRS1LQ9P0K9 344 aa7.17□□□□□ -1.26
SSR1-209ENST00000488834 AMOTL2Q9Y2J4 779 aa7.17□□□□□ -1.26
SSR1-209ENST00000488834 SMNDC1O75940 238 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSR1-209ENST00000488834 EDN3P14138 238 aa7.16□□□□□ -1.26
SSR1-209ENST00000488834 COL13A1Q5TAT6 717 aaPredicted RBP7.16□□□□□ -1.26
SSR1-209ENST00000488834 GDF6Q6KF10 455 aaPredicted RBP7.16□□□□□ -1.26
SSR1-209ENST00000488834 C8orf86Q6ZUL3 223 aa7.16□□□□□ -1.26
SSR1-209ENST00000488834 TMC7Q7Z402 723 aa7.16□□□□□ -1.26
SSR1-209ENST00000488834 FAM129BQ96TA1 746 aa7.16□□□□□ -1.26
SSR1-209ENST00000488834 LPIN3Q9BQK8 851 aa7.16□□□□□ -1.26
SSR1-209ENST00000488834 KRBA1A5PL33 1030 aa7.15□□□□□ -1.26
SSR1-209ENST00000488834 EREGO14944 169 aa7.15□□□□□ -1.26
SSR1-209ENST00000488834 GPR182O15218 404 aa7.15□□□□□ -1.26
SSR1-209ENST00000488834 COL9A3Q14050 684 aaPredicted RBP7.15□□□□□ -1.26
SSR1-209ENST00000488834 TRAPPC3LQ5T215 181 aa7.15□□□□□ -1.26
SSR1-209ENST00000488834 CEP135Q66GS9 1140 aa7.15□□□□□ -1.26
SSR1-209ENST00000488834 C20orf204Q6ZNR8 217 aa7.15□□□□□ -1.26
SSR1-209ENST00000488834 ZFYVE28Q9HCC9 887 aa7.15□□□□□ -1.26
SSR1-209ENST00000488834 CPNE3O75131 537 aaKnown RBP7.14□□□□□ -1.27
SSR1-209ENST00000488834 KIF4AO95239 1232 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 POLR3DP05423 398 aaPredicted RBP7.14□□□□□ -1.27
SSR1-209ENST00000488834 ATP11AP98196 1134 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 PLCB3Q01970 1234 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 ORC1Q13415 861 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 WFDC8Q8IUA0 241 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 TRIM11Q96F44 468 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 PLVAPQ9BX97 442 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 CHRDQ9H2X0 955 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 PRDM6Q9NQX0 595 aa7.14□□□□□ -1.27
SSR1-209ENST00000488834 AFF1P51825 1210 aaKnown RBP7.13□□□□□ -1.27
SSR1-209ENST00000488834 PRRT3Q5FWE3 981 aa7.13□□□□□ -1.27
SSR1-209ENST00000488834 GPAT2Q6NUI2 795 aa7.13□□□□□ -1.27
SSR1-209ENST00000488834 PBX4Q9BYU1 374 aa7.13□□□□□ -1.27
SSR1-209ENST00000488834 LACRTQ9GZZ8 138 aa7.13□□□□□ -1.27
SSR1-209ENST00000488834 RASSF4Q9H2L5 321 aa7.13□□□□□ -1.27
SSR1-209ENST00000488834 SALL4Q9UJQ4 1053 aa7.13□□□□□ -1.27
SSR1-209ENST00000488834 MAPK8P45983 427 aa7.12□□□□□ -1.27
SSR1-209ENST00000488834 CCDC27Q2M243 656 aa7.12□□□□□ -1.27
SSR1-209ENST00000488834 PLA2G4EQ3MJ16 856 aa7.12□□□□□ -1.27
SSR1-209ENST00000488834 CEP120Q8N960 986 aa7.12□□□□□ -1.27
SSR1-209ENST00000488834 TTC9Q92623 222 aa7.12□□□□□ -1.27
SSR1-209ENST00000488834 ASB16Q96NS5 453 aa7.12□□□□□ -1.27
SSR1-209ENST00000488834 OSMRQ99650 979 aa7.12□□□□□ -1.27
SSR1-209ENST00000488834 EIF1AYO14602 144 aaKnown RBP7.11□□□□□ -1.27
SSR1-209ENST00000488834 PROCP04070 461 aa7.11□□□□□ -1.27
SSR1-209ENST00000488834 NID1P14543 1247 aa7.11□□□□□ -1.27
SSR1-209ENST00000488834 PTPRAP18433 802 aa7.11□□□□□ -1.27
SSR1-209ENST00000488834 RAC1P63000 192 aa7.11□□□□□ -1.27
SSR1-209ENST00000488834 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
SSR1-209ENST00000488834 MSL1Q68DK7 614 aa7.11□□□□□ -1.27
SSR1-209ENST00000488834 DMRTC2Q8IXT2 367 aaPredicted RBP7.11□□□□□ -1.27
SSR1-209ENST00000488834 IL22RA1Q8N6P7 574 aa7.11□□□□□ -1.27
SSR1-209ENST00000488834 ALKBH8Q96BT7 664 aaKnown RBP7.11□□□□□ -1.27
SSR1-209ENST00000488834 DNAJC25Q9H1X3 360 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms