RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 ABCC8Q09428 1581 aa6.99□□□□□ -1.29
SPTA1-206ENST00000484520 LOC102724428A0A0B4J2F2 783 aa6.98□□□□□ -1.29
SPTA1-206ENST00000484520 F8W735 103 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-206ENST00000484520 PRKCSHP14314 528 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-206ENST00000484520 SIK1P57059 783 aa6.98□□□□□ -1.29
SPTA1-206ENST00000484520 CMTR1Q8N1G2 835 aaKnown RBP6.98□□□□□ -1.29
SPTA1-206ENST00000484520 TMEM130Q8N3G9 435 aa6.98□□□□□ -1.29
SPTA1-206ENST00000484520 IL22RA1Q8N6P7 574 aa6.98□□□□□ -1.29
SPTA1-206ENST00000484520 VTI1AQ96AJ9 217 aa6.98□□□□□ -1.29
SPTA1-206ENST00000484520 FAM196BA6NMK8 535 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 FOXO3O43524 673 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 XYLBO75191 536 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 EGFRP00533 1210 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 WEE1P30291 646 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 SLC51AQ86UW1 340 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 RGL4Q8IZJ4 473 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 CLUAP1Q96AJ1 413 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 MYO19Q96H55 970 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 PPP1R12CQ9BZL4 782 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 LRFN2Q9ULH4 789 aa6.97□□□□□ -1.29
SPTA1-206ENST00000484520 PRDM2Q13029 1718 aa6.96□□□□□ -1.29
SPTA1-206ENST00000484520 MMP20O60882 483 aa6.96□□□□□ -1.3
SPTA1-206ENST00000484520 GHRHP01286 108 aa6.96□□□□□ -1.3
SPTA1-206ENST00000484520 PSAPP07602 524 aa6.96□□□□□ -1.3
SPTA1-206ENST00000484520 AGGF1Q8N302 714 aaeCLIP6.96□□□□□ -1.3
SPTA1-206ENST00000484520 FNBP4Q8N3X1 1017 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-206ENST00000484520 NSUN5Q96P11 429 aaKnown RBP6.96□□□□□ -1.3
SPTA1-206ENST00000484520 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
SPTA1-206ENST00000484520 FANCD2Q9BXW9 1451 aa6.96□□□□□ -1.3
SPTA1-206ENST00000484520 SETDB1Q15047 1291 aa6.95□□□□□ -1.3
SPTA1-206ENST00000484520 PROSER2Q86WR7 435 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-206ENST00000484520 TREML1Q86YW5 311 aa6.95□□□□□ -1.3
SPTA1-206ENST00000484520 ARXQ96QS3 562 aa6.95□□□□□ -1.3
SPTA1-206ENST00000484520 KCNMB2Q9Y691 235 aa6.95□□□□□ -1.3
SPTA1-206ENST00000484520 COL17A1Q9UMD9 1497 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-206ENST00000484520 CEP164Q9UPV0 1460 aa6.94□□□□□ -1.3
SPTA1-206ENST00000484520 GLB1P16278 677 aa6.94□□□□□ -1.3
SPTA1-206ENST00000484520 LMOD1P29536 600 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-206ENST00000484520 CD97P48960 835 aa6.94□□□□□ -1.3
SPTA1-206ENST00000484520 Q6ZS46 218 aa6.94□□□□□ -1.3
SPTA1-206ENST00000484520 CALR3Q96L12 384 aaKnown RBP6.94□□□□□ -1.3
SPTA1-206ENST00000484520 RBSNQ9H1K0 784 aa6.94□□□□□ -1.3
SPTA1-206ENST00000484520 SRA1Q9HD15 236 aaKnown RBP6.94□□□□□ -1.3
SPTA1-206ENST00000484520 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
SPTA1-206ENST00000484520 TOP2BQ02880 1626 aa6.94□□□□□ -1.3
SPTA1-206ENST00000484520 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
SPTA1-206ENST00000484520 MED26O95402 600 aa6.93□□□□□ -1.3
SPTA1-206ENST00000484520 MAP4K3Q8IVH8 894 aa6.93□□□□□ -1.3
SPTA1-206ENST00000484520 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.93□□□□□ -1.3
SPTA1-206ENST00000484520 RAXQ9Y2V3 346 aa6.93□□□□□ -1.3
SPTA1-206ENST00000484520 PAX4O43316 350 aa6.92□□□□□ -1.3
SPTA1-206ENST00000484520 SOX18P35713 384 aa6.92□□□□□ -1.3
SPTA1-206ENST00000484520 DCAF11Q8TEB1 546 aa6.92□□□□□ -1.3
SPTA1-206ENST00000484520 UBL7Q96S82 380 aaPredicted RBP6.92□□□□□ -1.3
SPTA1-206ENST00000484520 BIVM-ERCC5R4GMW8 1640 aa6.91□□□□□ -1.3
SPTA1-206ENST00000484520 IGLV1-40P01703 118 aa6.91□□□□□ -1.3
SPTA1-206ENST00000484520 HOXD8P13378 290 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-206ENST00000484520 COX20Q5RI15 118 aa6.91□□□□□ -1.3
SPTA1-206ENST00000484520 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.91□□□□□ -1.3
SPTA1-206ENST00000484520 PPME1Q9Y570 386 aa6.91□□□□□ -1.3
SPTA1-206ENST00000484520 GSC2O15499 205 aa6.9□□□□□ -1.3
SPTA1-206ENST00000484520 TGFB1P01137 390 aa6.9□□□□□ -1.3
SPTA1-206ENST00000484520 IRAK1P51617 712 aa6.9□□□□□ -1.3
SPTA1-206ENST00000484520 GALNT11Q8NCW6 608 aa6.9□□□□□ -1.3
SPTA1-206ENST00000484520 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
SPTA1-206ENST00000484520 STOML1Q9UBI4 398 aa6.9□□□□□ -1.3
SPTA1-206ENST00000484520 CUX1P39880 1505 aa6.9□□□□□ -1.31
SPTA1-206ENST00000484520 SYNJ1O43426 1573 aa6.9□□□□□ -1.31
SPTA1-206ENST00000484520 DNMBPQ6XZF7 1577 aa6.9□□□□□ -1.31
SPTA1-206ENST00000484520 NESP48681 1621 aa6.9□□□□□ -1.31
SPTA1-206ENST00000484520 LINC01387J3KSC0 135 aa6.89□□□□□ -1.31
SPTA1-206ENST00000484520 COBLO75128 1261 aa6.89□□□□□ -1.31
SPTA1-206ENST00000484520 WISP1O95388 367 aa6.89□□□□□ -1.31
SPTA1-206ENST00000484520 FKBP5Q13451 457 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-206ENST00000484520 TRIP4Q15650 581 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-206ENST00000484520 NLRP13Q86W25 1043 aa6.89□□□□□ -1.31
SPTA1-206ENST00000484520 MUC3BQ9H195 1237 aa6.89□□□□□ -1.31
SPTA1-206ENST00000484520 OAS3Q9Y6K5 1087 aaKnown RBP6.89□□□□□ -1.31
SPTA1-206ENST00000484520 KIF27Q86VH2 1401 aa6.88□□□□□ -1.31
SPTA1-206ENST00000484520 KIAA1324LA8MWY0 1029 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-206ENST00000484520 DHX15O43143 795 aaKnown RBP6.88□□□□□ -1.31
SPTA1-206ENST00000484520 TXKP42681 527 aa6.88□□□□□ -1.31
SPTA1-206ENST00000484520 TXNDC11Q6PKC3 985 aa6.88□□□□□ -1.31
SPTA1-206ENST00000484520 ETFBKMTQ8IXQ9 262 aa6.88□□□□□ -1.31
SPTA1-206ENST00000484520 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
SPTA1-206ENST00000484520 ARMC10Q8N2F6 343 aa6.88□□□□□ -1.31
SPTA1-206ENST00000484520 LACRTQ9GZZ8 138 aa6.88□□□□□ -1.31
SPTA1-206ENST00000484520 MRC2Q9UBG0 1479 aa6.87□□□□□ -1.31
SPTA1-206ENST00000484520 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-206ENST00000484520 CD68P34810 354 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-206ENST00000484520 GP2P55259 537 aaKnown RBP6.87□□□□□ -1.31
SPTA1-206ENST00000484520 ATP11AP98196 1134 aa6.87□□□□□ -1.31
SPTA1-206ENST00000484520 CDCA8Q53HL2 280 aa6.87□□□□□ -1.31
SPTA1-206ENST00000484520 COL13A1Q5TAT6 717 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-206ENST00000484520 ACAD11Q709F0 780 aa6.87□□□□□ -1.31
SPTA1-206ENST00000484520 PRIMPOLQ96LW4 560 aa6.87□□□□□ -1.31
SPTA1-206ENST00000484520 FMNL2Q96PY5 1086 aa6.87□□□□□ -1.31
SPTA1-206ENST00000484520 KCNK4Q9NYG8 393 aa6.87□□□□□ -1.31
SPTA1-206ENST00000484520 TOPBP1Q92547 1522 aa6.86□□□□□ -1.31
SPTA1-206ENST00000484520 CDC25BP30305 580 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms