RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 LRSAM1Q6UWE0 723 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 SYCP3Q8IZU3 236 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 ATP6V0A2Q9Y487 856 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 SCINQ9Y6U3 715 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 PCYT1AP49585 367 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 VPS41P49754 854 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 CARMIL2Q6F5E8 1435 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 STX6O43752 255 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 RUFY4Q6ZNE9 571 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 SPINK5Q9NQ38 1064 aaPredicted RBP10.79□□□□□ -0.68
ALMS1-204ENST00000484298 NLRP2Q9NX02 1062 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 BAG4O95429 457 aaKnown RBP10.79□□□□□ -0.68
ALMS1-204ENST00000484298 CUL4BQ13620 913 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 PUF60Q9UHX1 559 aaKnown RBP10.79□□□□□ -0.68
ALMS1-204ENST00000484298 DNAI1Q9UI46 699 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 WASHC2CQ9Y4E1 1318 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 CCDC68Q9H2F9 335 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 CPLX3Q8WVH0 158 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 UBLCP1Q8WVY7 318 aaPredicted RBP10.79□□□□□ -0.68
ALMS1-204ENST00000484298 TMX1Q9H3N1 280 aa10.79□□□□□ -0.68
ALMS1-204ENST00000484298 TXNDC9O14530 226 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 CHD1LQ86WJ1 897 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.78□□□□□ -0.68
ALMS1-204ENST00000484298 UBASH3AP57075 661 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 CKAP2LQ8IYA6 745 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 UTP14AQ9BVJ6 771 aaKnown RBP10.78□□□□□ -0.68
ALMS1-204ENST00000484298 BMP15O95972 392 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 CCDC124Q96CT7 223 aaKnown RBP10.78□□□□□ -0.68
ALMS1-204ENST00000484298 KLHL40Q2TBA0 621 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 RAPGEF4Q8WZA2 1011 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 PLEKHH2Q8IVE3 1493 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 STAG1Q8WVM7 1258 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 CTTNBP2NLQ9P2B4 639 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 LMNB2Q03252 620 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 TRIM47Q96LD4 638 aa10.78□□□□□ -0.68
ALMS1-204ENST00000484298 DHX29Q7Z478 1369 aaKnown RBP10.78□□□□□ -0.68
ALMS1-204ENST00000484298 NRBF2Q96F24 287 aa10.77□□□□□ -0.68
ALMS1-204ENST00000484298 PEX19P40855 299 aa10.77□□□□□ -0.68
ALMS1-204ENST00000484298 RNF216Q9NWF9 866 aaPredicted RBP10.77□□□□□ -0.68
ALMS1-204ENST00000484298 LMNAP02545 664 aaKnown RBP10.77□□□□□ -0.69
ALMS1-204ENST00000484298 HPDP32754 393 aaPredicted RBP10.77□□□□□ -0.69
ALMS1-204ENST00000484298 PNMA8AQ86V59 439 aaPredicted RBP10.77□□□□□ -0.69
ALMS1-204ENST00000484298 AIDAQ96BJ3 306 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 IMPG2Q9BZV3 1241 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 FSIP1Q8NA03 581 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 PHACTR2O75167 634 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 FAM160A1Q05DH4 1040 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 UTP11Q9Y3A2 253 aaKnown RBP10.77□□□□□ -0.69
ALMS1-204ENST00000484298 ZFXP17010 805 aaPredicted RBP10.77□□□□□ -0.69
ALMS1-204ENST00000484298 HNRNPMP52272 730 aaKnown RBP eCLIP10.77□□□□□ -0.691e-10■■■■■ 36.4
ALMS1-204ENST00000484298 PSMD6Q15008 389 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 CCDC102BQ68D86 513 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 VSIG1Q86XK7 387 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 FNBP4Q8N3X1 1017 aaPredicted RBP10.77□□□□□ -0.69
ALMS1-204ENST00000484298 HAUS2Q9NVX0 235 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 COPG1Q9Y678 874 aaKnown RBP10.77□□□□□ -0.69
ALMS1-204ENST00000484298 SERPINI2O75830 405 aa10.77□□□□□ -0.69
ALMS1-204ENST00000484298 ZC3H6P61129 1189 aaKnown RBP10.77□□□□□ -0.69
ALMS1-204ENST00000484298 FAM200AQ8TCP9 573 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 SLMAPQ14BN4 828 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 ANKFY1Q9P2R3 1169 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 KRT3P12035 628 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 SYT1P21579 422 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 USP5P45974 858 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 ESRRGP62508 458 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 CWC27Q6UX04 472 aaKnown RBP10.76□□□□□ -0.69
ALMS1-204ENST00000484298 ERMNQ8TAM6 284 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 MPHOSPH8Q99549 860 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 TBCAO75347 108 aaKnown RBP10.76□□□□□ -0.69
ALMS1-204ENST00000484298 PALMDQ9NP74 551 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 NUB1Q9Y5A7 615 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 ORC6Q9Y5N6 252 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 SEL1L2Q5TEA6 688 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 PPP1R21Q6ZMI0 780 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 CABS1Q96KC9 395 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.76□□□□□ -0.69
ALMS1-204ENST00000484298 RB1CC1Q8TDY2 1594 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 TRIM68Q6AZZ1 485 aa10.76□□□□□ -0.69
ALMS1-204ENST00000484298 EVI5O60447 810 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 IFT81Q8WYA0 676 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 ZSCAN16Q9H4T2 348 aaPredicted RBP10.75□□□□□ -0.69
ALMS1-204ENST00000484298 MX2P20592 715 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 PLCB3Q01970 1234 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 AACSQ86V21 672 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 GAS2L2Q8NHY3 880 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 WDHD1O75717 1129 aaPredicted RBP10.75□□□□□ -0.69
ALMS1-204ENST00000484298 ZKSCAN5Q9Y2L8 839 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 ARHGEF9O43307 516 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 BICDL1Q6ZP65 573 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 EFCC1Q9HA90 598 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 SPC25Q9HBM1 224 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 A0A1B0GW55 424 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 DUX4L2P0CJ85 424 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 DUX4L3P0CJ86 424 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 DUX4L4P0CJ87 422 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 DUX4L5P0CJ88 424 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 DUX4L6P0CJ89 424 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 DUX4L7P0CJ90 424 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 MTMR3Q13615 1198 aa10.75□□□□□ -0.69
ALMS1-204ENST00000484298 RASIP1Q5U651 963 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms