RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CDCA8Q53HL2 280 aa7.17□□□□□ -1.26
COPA-204ENST00000481522 WFDC8Q8IUA0 241 aa7.17□□□□□ -1.26
COPA-204ENST00000481522 CILP2Q8IUL8 1156 aa7.17□□□□□ -1.26
COPA-204ENST00000481522 ANKMY2Q8IV38 441 aa7.17□□□□□ -1.26
COPA-204ENST00000481522 TSEN2Q8NCE0 465 aaKnown RBP7.17□□□□□ -1.26
COPA-204ENST00000481522 FRRS1LQ9P0K9 344 aa7.17□□□□□ -1.26
COPA-204ENST00000481522 CPB1P15086 417 aa7.16□□□□□ -1.26
COPA-204ENST00000481522 ALDH16A1Q8IZ83 802 aa7.16□□□□□ -1.26
COPA-204ENST00000481522 PBXIP1Q96AQ6 731 aa7.16□□□□□ -1.26
COPA-204ENST00000481522 LPIN3Q9BQK8 851 aa7.16□□□□□ -1.26
COPA-204ENST00000481522 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
COPA-204ENST00000481522 PPP1R12BO60237 982 aaPredicted RBP7.15□□□□□ -1.26
COPA-204ENST00000481522 DKK1O94907 266 aa7.15□□□□□ -1.26
COPA-204ENST00000481522 FAM200AQ8TCP9 573 aa7.15□□□□□ -1.26
COPA-204ENST00000481522 HINFPQ9BQA5 517 aa7.15□□□□□ -1.26
COPA-204ENST00000481522 DBNDD2Q9BQY9 259 aa7.15□□□□□ -1.26
COPA-204ENST00000481522 C1orf115Q9H7X2 142 aa7.15□□□□□ -1.26
COPA-204ENST00000481522 NOVA2Q9UNW9 492 aaKnown RBP7.15□□□□□ -1.26
COPA-204ENST00000481522 PAPLNO95428 1278 aa7.14□□□□□ -1.27
COPA-204ENST00000481522 HOXA10P31260 410 aaPredicted RBP7.14□□□□□ -1.27
COPA-204ENST00000481522 IER5Q5VY09 327 aa7.14□□□□□ -1.27
COPA-204ENST00000481522 ARMC10Q8N2F6 343 aa7.14□□□□□ -1.27
COPA-204ENST00000481522 TTC9Q92623 222 aa7.14□□□□□ -1.27
COPA-204ENST00000481522 C7orf69Q9H7B7 122 aa7.14□□□□□ -1.27
COPA-204ENST00000481522 MAP3K6O95382 1288 aa7.13□□□□□ -1.27
COPA-204ENST00000481522 PERM1Q5SV97 790 aa7.13□□□□□ -1.27
COPA-204ENST00000481522 RNF43Q68DV7 783 aa7.13□□□□□ -1.27
COPA-204ENST00000481522 ELMSAN1Q6PJG2 1045 aa7.13□□□□□ -1.27
COPA-204ENST00000481522 STAG2Q8N3U4 1231 aa7.13□□□□□ -1.27
COPA-204ENST00000481522 ARXQ96QS3 562 aa7.13□□□□□ -1.27
COPA-204ENST00000481522 UBL7Q96S82 380 aaPredicted RBP7.13□□□□□ -1.27
COPA-204ENST00000481522 MRPL18Q9H0U6 180 aaKnown RBP7.13□□□□□ -1.27
COPA-204ENST00000481522 ELOAQ14241 798 aaKnown RBP7.12□□□□□ -1.27
COPA-204ENST00000481522 C21orf2O43822 256 aa7.11□□□□□ -1.27
COPA-204ENST00000481522 PLAURQ03405 335 aa7.11□□□□□ -1.27
COPA-204ENST00000481522 TRIM42Q8IWZ5 723 aa7.11□□□□□ -1.27
COPA-204ENST00000481522 TRPM4Q8TD43 1214 aa7.11□□□□□ -1.27
COPA-204ENST00000481522 CHMP7Q8WUX9 453 aaPredicted RBP7.11□□□□□ -1.27
COPA-204ENST00000481522 SCG3Q8WXD2 468 aaKnown RBP7.11□□□□□ -1.27
COPA-204ENST00000481522 C2orf49Q9BVC5 232 aaPredicted RBP7.11□□□□□ -1.27
COPA-204ENST00000481522 ATAD2Q6PL18 1390 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 ZBTB42B2RXF5 422 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 TGFBR3LH3BV60 316 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 ATG7O95352 703 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 EPB42P16452 691 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 PKN1Q16512 942 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 DHX32Q7L7V1 743 aaKnown RBP7.1□□□□□ -1.27
COPA-204ENST00000481522 GAS2L2Q8NHY3 880 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 SHKBP1Q8TBC3 707 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 NGLY1Q96IV0 654 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 CCDC39Q9UFE4 941 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 ANGEL1Q9UNK9 670 aaKnown RBP7.1□□□□□ -1.27
COPA-204ENST00000481522 CARMIL2Q6F5E8 1435 aa7.1□□□□□ -1.27
COPA-204ENST00000481522 ACIN1Q9UKV3 1341 aaKnown RBP7.09□□□□□ -1.27
COPA-204ENST00000481522 DHX15O43143 795 aaKnown RBP7.09□□□□□ -1.27
COPA-204ENST00000481522 LGR5O75473 907 aa7.09□□□□□ -1.27
COPA-204ENST00000481522 FARP2O94887 1054 aaPredicted RBP7.09□□□□□ -1.27
COPA-204ENST00000481522 SWI5Q1ZZU3 235 aa7.09□□□□□ -1.27
COPA-204ENST00000481522 AGGF1Q8N302 714 aaeCLIP7.09□□□□□ -1.27
COPA-204ENST00000481522 STK32AQ8WU08 396 aa7.09□□□□□ -1.27
COPA-204ENST00000481522 ARID3AQ99856 593 aa7.09□□□□□ -1.27
COPA-204ENST00000481522 SMG9Q9H0W8 520 aaKnown RBP7.09□□□□□ -1.27
COPA-204ENST00000481522 HMX2A2RU54 273 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 PPP1R15AO75807 674 aaPredicted RBP7.08□□□□□ -1.28
COPA-204ENST00000481522 GLB1P16278 677 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 IGFBP4P22692 258 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 SRPK2P78362 688 aaKnown RBP7.08□□□□□ -1.28
COPA-204ENST00000481522 GPLD1P80108 840 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 MLLT1Q03111 559 aaPredicted RBP7.08□□□□□ -1.28
COPA-204ENST00000481522 RTN1Q16799 776 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 LCNL1Q6ZST4 164 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 VTI1AQ96AJ9 217 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 ZFATQ9P243 1243 aa7.08□□□□□ -1.28
COPA-204ENST00000481522 DMGDHQ9UI17 866 aaKnown RBP7.08□□□□□ -1.28
COPA-204ENST00000481522 PRNPP04156 253 aa7.07□□□□□ -1.28
COPA-204ENST00000481522 ARID4AP29374 1257 aaPredicted RBP7.07□□□□□ -1.28
COPA-204ENST00000481522 KRT25Q7Z3Z0 450 aa7.07□□□□□ -1.28
COPA-204ENST00000481522 C1QL4Q86Z23 238 aa7.07□□□□□ -1.28
COPA-204ENST00000481522 FOXO3O43524 673 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 TARSP26639 723 aaKnown RBP7.06□□□□□ -1.28
COPA-204ENST00000481522 GRNP28799 593 aaKnown RBP7.06□□□□□ -1.28
COPA-204ENST00000481522 TMEM164Q5U3C3 297 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 TTLL10Q6ZVT0 673 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 DCAF11Q8TEB1 546 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 FBXL18Q96ME1 805 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 CSRNP1Q96S65 589 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 SRA1Q9HD15 236 aaKnown RBP7.06□□□□□ -1.28
COPA-204ENST00000481522 C11orf16Q9NQ32 467 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 RAPGEFL1Q9UHV5 662 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 BCS1LQ9Y276 419 aa7.06□□□□□ -1.28
COPA-204ENST00000481522 PRMT3O60678 531 aa7.05□□□□□ -1.28
COPA-204ENST00000481522 RARAP10276 462 aa7.05□□□□□ -1.28
COPA-204ENST00000481522 WEE1P30291 646 aa7.05□□□□□ -1.28
COPA-204ENST00000481522 INPP5BP32019 993 aa7.05□□□□□ -1.28
COPA-204ENST00000481522 IFT43Q96FT9 208 aa7.05□□□□□ -1.28
COPA-204ENST00000481522 EIF2AK2P19525 551 aaKnown RBP7.04□□□□□ -1.28
COPA-204ENST00000481522 IDH3AP50213 366 aa7.04□□□□□ -1.28
COPA-204ENST00000481522 NRLP54845 237 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms