RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 JCADQ9P266 1359 aa12.83□□□□□ -0.36
VPS52-217ENST00000478934 AFDNP55196 1824 aaKnown RBP12.82□□□□□ -0.36
VPS52-217ENST00000478934 FAM177BA6PVY3 158 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 CCT2P78371 535 aaKnown RBP12.82□□□□□ -0.36
VPS52-217ENST00000478934 SCRN1Q12765 414 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 FAM89AQ96GI7 184 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 FTOQ9C0B1 505 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPS52-217ENST00000478934 NCOA5Q9HCD5 579 aaKnown RBP12.82□□□□□ -0.36
VPS52-217ENST00000478934 GPHNQ9NQX3 736 aaPredicted RBP12.82□□□□□ -0.36
VPS52-217ENST00000478934 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
VPS52-217ENST00000478934 GLI3P10071 1580 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 ARFGEF2Q9Y6D5 1785 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 A0A1B0GUL7 405 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 FKBP4Q02790 459 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPS52-217ENST00000478934 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 TSGA10IPQ3SY00 556 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 PI16Q6UXB8 463 aa12.82□□□□□ -0.36
VPS52-217ENST00000478934 FGD1P98174 961 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 ANKRD1Q15327 319 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 GTF3C6Q969F1 213 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 M0R2C6 588 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 KRT85P78386 507 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 SCARF1Q14162 830 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 VSIG10Q8N0Z9 540 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
VPS52-217ENST00000478934 EYA2O00167 538 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 PGBD1Q96JS3 809 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 DACT1Q9NYF0 836 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
VPS52-217ENST00000478934 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
VPS52-217ENST00000478934 IL2RBP14784 551 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 HAND2P61296 217 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 GUCY1B3Q02153 619 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 RAB11FIP4Q86YS3 637 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 LEO1Q8WVC0 666 aaPredicted RBP12.8□□□□□ -0.36
VPS52-217ENST00000478934 SPATA32Q96LK8 384 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 CPDO75976 1380 aa12.8□□□□□ -0.36
VPS52-217ENST00000478934 CTDNEP1O95476 244 aa12.79□□□□□ -0.36
VPS52-217ENST00000478934 HSPD1P10809 573 aaKnown RBP12.79□□□□□ -0.36
VPS52-217ENST00000478934 GPTP24298 496 aa12.79□□□□□ -0.36
VPS52-217ENST00000478934 DNAJC10Q8IXB1 793 aa12.79□□□□□ -0.36
VPS52-217ENST00000478934 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
VPS52-217ENST00000478934 MAST3O60307 1309 aa12.79□□□□□ -0.36
VPS52-217ENST00000478934 KDM4AO75164 1064 aa12.79□□□□□ -0.36
VPS52-217ENST00000478934 EVA1CP58658 441 aa12.79□□□□□ -0.36
VPS52-217ENST00000478934 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
VPS52-217ENST00000478934 A0A087WWV3 80 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 NR1I2O75469 434 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
VPS52-217ENST00000478934 E7EWF7 191 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 PDCP20941 246 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 KRT32Q14532 448 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 HLFQ16534 295 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 ZMYM1Q5SVZ6 1142 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 LUZP1Q86V48 1076 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 SLAIN2Q9P270 581 aa12.78□□□□□ -0.36
VPS52-217ENST00000478934 H3BQV1 296 aa12.77□□□□□ -0.36
VPS52-217ENST00000478934 RESTQ13127 1097 aa12.77□□□□□ -0.36
VPS52-217ENST00000478934 IFFO2Q5TF58 517 aa12.77□□□□□ -0.36
VPS52-217ENST00000478934 FAM184AQ8NB25 1140 aa12.77□□□□□ -0.36
VPS52-217ENST00000478934 TAOK2Q9UL54 1235 aa12.77□□□□□ -0.36
VPS52-217ENST00000478934 PKD1L3Q7Z443 1732 aa12.77□□□□□ -0.36
VPS52-217ENST00000478934 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.36
VPS52-217ENST00000478934 FOXP2O15409 715 aa12.77□□□□□ -0.37
VPS52-217ENST00000478934 LETM1O95202 739 aaPredicted RBP12.77□□□□□ -0.37
VPS52-217ENST00000478934 DHX32Q7L7V1 743 aaKnown RBP12.77□□□□□ -0.37
VPS52-217ENST00000478934 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
VPS52-217ENST00000478934 PIGBQ92521 554 aa12.77□□□□□ -0.37
VPS52-217ENST00000478934 MRVI1Q9Y6F6 885 aa12.77□□□□□ -0.37
VPS52-217ENST00000478934 SH3TC1Q8TE82 1336 aa12.77□□□□□ -0.37
VPS52-217ENST00000478934 GOLGA6L4A6NEF3 574 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
VPS52-217ENST00000478934 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 UVSSAQ2YD98 709 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
VPS52-217ENST00000478934 XAGE2Q96GT9 111 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 NUP62CLQ9H1M0 184 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
VPS52-217ENST00000478934 COL5A2P05997 1499 aaPredicted RBP12.76□□□□□ -0.37
VPS52-217ENST00000478934 MCM5P33992 734 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 ZAP70P43403 619 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 EXOSC10Q01780 885 aaKnown RBP12.76□□□□□ -0.37
VPS52-217ENST00000478934 TYRO3Q06418 890 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 TCIRG1Q13488 830 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
VPS52-217ENST00000478934 WASHC4Q2M389 1173 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 GORABQ5T7V8 394 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 ISCA1Q9BUE6 129 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms