RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TRMT44Q8IYL2 757 aaKnown RBP9.15□□□□□ -0.94
LRCH3-215ENST00000476664 C1QTNF2Q9BXJ5 285 aa9.15□□□□□ -0.94
LRCH3-215ENST00000476664 FAM8A1Q9UBU6 413 aa9.15□□□□□ -0.94
LRCH3-215ENST00000476664 NHSL1Q5SYE7 1610 aa9.15□□□□□ -0.94
LRCH3-215ENST00000476664 AFF2P51816 1311 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 SCTRP47872 440 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 RAB15P59190 212 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 PPP4CP60510 307 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 RBM6P78332 1123 aaKnown RBP9.14□□□□□ -0.95
LRCH3-215ENST00000476664 FOXK2Q01167 660 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.14□□□□□ -0.95
LRCH3-215ENST00000476664 EFCAB2Q5VUJ9 269 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 PPARGC1BQ86YN6 1023 aaKnown RBP9.14□□□□□ -0.95
LRCH3-215ENST00000476664 SLC9A9Q8IVB4 645 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 CCDC146Q8IYE0 955 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 PRPF38AQ8NAV1 312 aaKnown RBP9.14□□□□□ -0.95
LRCH3-215ENST00000476664 APPBP2Q92624 585 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 DEPDC7Q96QD5 511 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 SPON2Q9BUD6 331 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 SNTG2Q9NY99 539 aa9.14□□□□□ -0.95
LRCH3-215ENST00000476664 R3HCC1Q9Y3T6 440 aaKnown RBP9.14□□□□□ -0.95
LRCH3-215ENST00000476664 OPLAHO14841 1288 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 PDGFRBP09619 1106 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 ZAP70P43403 619 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 RAB33AQ14088 237 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 PTCRAQ6ISU1 281 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-215ENST00000476664 ZNF511Q8NB15 262 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 BAP1Q92560 729 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 FOXJ1Q92949 421 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 GEMIN8Q9NWZ8 242 aaKnown RBP9.13□□□□□ -0.95
LRCH3-215ENST00000476664 SCHIP1Q9P0W5 487 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-215ENST00000476664 MYO5CQ9NQX4 1742 aa9.13□□□□□ -0.95
LRCH3-215ENST00000476664 HMGB1P1B2RPK0 211 aaPredicted RBP9.12□□□□□ -0.95
LRCH3-215ENST00000476664 NASPP49321 788 aaPredicted RBP9.12□□□□□ -0.95
LRCH3-215ENST00000476664 APLP1P51693 650 aa9.12□□□□□ -0.95
LRCH3-215ENST00000476664 AMPD3Q01432 767 aa9.12□□□□□ -0.95
LRCH3-215ENST00000476664 MEI1Q5TIA1 1274 aa9.12□□□□□ -0.95
LRCH3-215ENST00000476664 KIAA0825Q8IV33 1275 aa9.12□□□□□ -0.95
LRCH3-215ENST00000476664 NKX2-3Q8TAU0 364 aa9.12□□□□□ -0.95
LRCH3-215ENST00000476664 STAG1Q8WVM7 1258 aa9.12□□□□□ -0.95
LRCH3-215ENST00000476664 KCTD15Q96SI1 283 aaPredicted RBP9.12□□□□□ -0.95
LRCH3-215ENST00000476664 FANCLQ9NW38 375 aa9.12□□□□□ -0.95
LRCH3-215ENST00000476664 ZC3H13Q5T200 1668 aaKnown RBP9.12□□□□□ -0.95
LRCH3-215ENST00000476664 KIDINS220Q9ULH0 1771 aa9.12□□□□□ -0.95
LRCH3-215ENST00000476664 SHPRHQ149N8 1683 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 C11orf91Q3C1V1 193 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 HOMER1Q86YM7 354 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 FMNL3Q8IVF7 1028 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
LRCH3-215ENST00000476664 JDP2Q8WYK2 163 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 GABBR1Q9UBS5 961 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 FGD6Q6ZV73 1430 aa9.11□□□□□ -0.95
LRCH3-215ENST00000476664 KDM5DQ9BY66 1539 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 LRRC9Q6ZRR7 1453 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 A6NJY4 79 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 KLF4O43474 513 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 C1QTNF8P60827 252 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 PWP1Q13610 501 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 RASA3Q14644 834 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 DMRTA1Q5VZB9 504 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 THEMISQ8N1K5 641 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-215ENST00000476664 SH3TC2Q8TF17 1288 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 PMM1Q92871 262 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 CEP89Q96ST8 783 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 OSBPL3Q9H4L5 887 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 ETNK1Q9HBU6 452 aa9.1□□□□□ -0.95
LRCH3-215ENST00000476664 BHMG1C9JSJ3 638 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-215ENST00000476664 ERVH48-1M5A8F1 160 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 USP17L7P0C7H9 530 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 COL9A2Q14055 689 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-215ENST00000476664 MTFR1Q15390 333 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 C8orf34Q49A92 452 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 FAM26DQ5JW98 314 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 TBCELQ5QJ74 424 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 ETFBKMTQ8IXQ9 262 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 OSBPL7Q9BZF2 842 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 COPRSQ9NQ92 184 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 KBTBD4Q9NVX7 518 aa9.09□□□□□ -0.95
LRCH3-215ENST00000476664 PRC1O43663 620 aa9.08□□□□□ -0.96
LRCH3-215ENST00000476664 ETFBP38117 255 aa9.08□□□□□ -0.96
LRCH3-215ENST00000476664 SMTNP53814 917 aa9.08□□□□□ -0.96
LRCH3-215ENST00000476664 TBX4P57082 545 aa9.08□□□□□ -0.96
LRCH3-215ENST00000476664 ODR4Q5SWX8 454 aa9.08□□□□□ -0.96
LRCH3-215ENST00000476664 TRPM4Q8TD43 1214 aa9.08□□□□□ -0.96
LRCH3-215ENST00000476664 NGLY1Q96IV0 654 aa9.08□□□□□ -0.96
LRCH3-215ENST00000476664 NOC4LQ9BVI4 516 aaKnown RBP9.08□□□□□ -0.96
LRCH3-215ENST00000476664 NWD1Q149M9 1564 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 SNPHO15079 494 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 GNRH1P01148 92 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 PBX2P40425 430 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 DGKZQ13574 1117 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 RTN1Q16799 776 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 KIAA0907Q7Z7F0 614 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms