RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	PDGFA	P04085	211 aa		9.09	□□□□□ -0.95
PRKD3-208	ENST00000475912	HOXD8	P13378	290 aa	Predicted RBP	9.09	□□□□□ -0.95
PRKD3-208	ENST00000475912	TTC39B	Q5VTQ0	682 aa	Predicted RBP	9.09	□□□□□ -0.95
PRKD3-208	ENST00000475912	B4GALNT3	Q6L9W6	998 aa		9.09	□□□□□ -0.95
PRKD3-208	ENST00000475912	DMRTC2	Q8IXT2	367 aa	Predicted RBP	9.09	□□□□□ -0.95
PRKD3-208	ENST00000475912		A0A0A0MRY4	1105 aa		9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912	GHRH	P01286	108 aa		9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912	NPR3	P17342	541 aa		9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912	ZNF438	Q7Z4V0	828 aa		9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912	PLD4	Q96BZ4	506 aa		9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912	GGNBP2	Q9H3C7	697 aa		9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912	ABI2	Q9NYB9	513 aa	Predicted RBP	9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912	TMEM63C	Q9P1W3	806 aa		9.08	□□□□□ -0.96
PRKD3-208	ENST00000475912		A6NHS1	94 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	FAM13A	O94988	1023 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	CYP2E1	P05181	493 aa	Predicted RBP	9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	PCSK2	P16519	638 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	MZF1	P28698	734 aa	Predicted RBP	9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	FKBP4	Q02790	459 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	SF3B2	Q13435	895 aa	Known RBP	9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	AAMP	Q13685	434 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	GRIK4	Q16099	956 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	MSL1	Q68DK7	614 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	PDE12	Q6L8Q7	609 aa	Known RBP	9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	ALKBH2	Q6NS38	261 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	TTC9	Q92623	222 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	ELP3	Q9H9T3	547 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	POLI	Q9UNA4	740 aa		9.07	□□□□□ -0.96
PRKD3-208	ENST00000475912	APBA3	O96018	575 aa		9.06	□□□□□ -0.96
PRKD3-208	ENST00000475912	RPLP1	P05386	114 aa	Known RBP	9.06	□□□□□ -0.96
PRKD3-208	ENST00000475912	SERPINB4	P48594	390 aa		9.06	□□□□□ -0.96
PRKD3-208	ENST00000475912	C8orf34	Q49A92	452 aa		9.06	□□□□□ -0.96
PRKD3-208	ENST00000475912	RBSN	Q9H1K0	784 aa		9.06	□□□□□ -0.96
PRKD3-208	ENST00000475912	CECR2	Q9BXF3	1484 aa		9.05	□□□□□ -0.96
PRKD3-208	ENST00000475912	RAC1	P63000	192 aa		9.05	□□□□□ -0.96
PRKD3-208	ENST00000475912	HYAL2	Q12891	473 aa		9.05	□□□□□ -0.96
PRKD3-208	ENST00000475912	GDF6	Q6KF10	455 aa	Predicted RBP	9.05	□□□□□ -0.96
PRKD3-208	ENST00000475912	ILDR2	Q71H61	639 aa		9.05	□□□□□ -0.96
PRKD3-208	ENST00000475912	WFDC8	Q8IUA0	241 aa		9.05	□□□□□ -0.96
PRKD3-208	ENST00000475912	CNTN3	Q9P232	1028 aa		9.05	□□□□□ -0.96
PRKD3-208	ENST00000475912	XP32	Q5T750	250 aa		9.04	□□□□□ -0.96
PRKD3-208	ENST00000475912	TTC16	Q8NEE8	873 aa		9.04	□□□□□ -0.96
PRKD3-208	ENST00000475912	KANSL3	Q9P2N6	904 aa		9.04	□□□□□ -0.96
PRKD3-208	ENST00000475912		H3BRB1	525 aa		9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	FZD6	O60353	706 aa		9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	ELN	P15502	786 aa		9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	ATP11A	P98196	1134 aa		9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	XKR5	Q6UX68	686 aa		9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	FMR1NB	Q8N0W7	255 aa	Predicted RBP	9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	TUT1	Q9H6E5	874 aa	Known RBP	9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	EGFL7	Q9UHF1	273 aa		9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	TRIM33	Q9UPN9	1127 aa		9.03	□□□□□ -0.96
PRKD3-208	ENST00000475912	ICMT	O60725	284 aa		9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	KIF4A	O95239	1232 aa		9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	BAG6	P46379	1132 aa		9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	C1orf127	Q8N9H9	656 aa		9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	SPACA7	Q96KW9	195 aa		9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	NACC1	Q96RE7	527 aa		9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	CCDC87	Q9NVE4	849 aa		9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	CC2D2A	Q9P2K1	1620 aa		9.02	□□□□□ -0.97
PRKD3-208	ENST00000475912	PDE4C	Q08493	712 aa		9.01	□□□□□ -0.97
PRKD3-208	ENST00000475912	SHISA2	Q6UWI4	295 aa		9.01	□□□□□ -0.97
PRKD3-208	ENST00000475912	NCAPG2	Q86XI2	1143 aa		9.01	□□□□□ -0.97
PRKD3-208	ENST00000475912	IL22RA1	Q8N6P7	574 aa		9.01	□□□□□ -0.97
PRKD3-208	ENST00000475912	RASSF4	Q9H2L5	321 aa		9.01	□□□□□ -0.97
PRKD3-208	ENST00000475912	SELP	P16109	830 aa		9	□□□□□ -0.97
PRKD3-208	ENST00000475912	TXNDC2	Q86VQ3	553 aa		9	□□□□□ -0.97
PRKD3-208	ENST00000475912	GLYCTK	Q8IVS8	523 aa		9	□□□□□ -0.97
PRKD3-208	ENST00000475912	DTWD1	Q8N5C7	304 aa		9	□□□□□ -0.97
PRKD3-208	ENST00000475912	CHRD	Q9H2X0	955 aa		9	□□□□□ -0.97
PRKD3-208	ENST00000475912	CES1	P23141	567 aa		8.99	□□□□□ -0.97
PRKD3-208	ENST00000475912	GATA4	P43694	442 aa		8.99	□□□□□ -0.97
PRKD3-208	ENST00000475912	CEP135	Q66GS9	1140 aa		8.99	□□□□□ -0.97
PRKD3-208	ENST00000475912	FBXO11	Q86XK2	927 aa		8.99	□□□□□ -0.97
PRKD3-208	ENST00000475912	C9orf172	C9J069	976 aa		8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	DEAF1	O75398	565 aa	Predicted RBP	8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	ACPP	P15309	386 aa		8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	USP5	P45974	858 aa		8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	ECM1	Q16610	540 aa		8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	CEP120	Q8N960	986 aa		8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	LACRT	Q9GZZ8	138 aa		8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	SALL4	Q9UJQ4	1053 aa		8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	FOXD3	Q9UJU5	478 aa	Predicted RBP	8.98	□□□□□ -0.97
PRKD3-208	ENST00000475912	TNFRSF21	O75509	655 aa		8.97	□□□□□ -0.97
PRKD3-208	ENST00000475912	SMNDC1	O75940	238 aa	Known RBP eCLIP	8.97	□□□□□ -0.97
PRKD3-208	ENST00000475912	FURIN	P09958	794 aa		8.97	□□□□□ -0.97
PRKD3-208	ENST00000475912	DOC2B	Q14184	412 aa		8.97	□□□□□ -0.97
PRKD3-208	ENST00000475912	ADAMTSL4	Q6UY14	1074 aa		8.97	□□□□□ -0.97
PRKD3-208	ENST00000475912	GJD3	Q8N144	294 aa		8.97	□□□□□ -0.97
PRKD3-208	ENST00000475912	PBX4	Q9BYU1	374 aa		8.97	□□□□□ -0.97
PRKD3-208	ENST00000475912	EREG	O14944	169 aa		8.96	□□□□□ -0.98
PRKD3-208	ENST00000475912	ADAM23	O75077	832 aa		8.96	□□□□□ -0.98
PRKD3-208	ENST00000475912	EHHADH	Q08426	723 aa		8.96	□□□□□ -0.98
PRKD3-208	ENST00000475912	ADGRE1	Q14246	886 aa		8.96	□□□□□ -0.98
PRKD3-208	ENST00000475912	SNX29	Q8TEQ0	813 aa		8.96	□□□□□ -0.98
PRKD3-208	ENST00000475912	LENG1	Q96BZ8	264 aa	Predicted RBP	8.96	□□□□□ -0.98
PRKD3-208	ENST00000475912	USP21	Q9UK80	565 aa		8.96	□□□□□ -0.98
PRKD3-208	ENST00000475912	PHACTR2	O75167	634 aa		8.95	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms