RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 NUP153P49790 1475 aaKnown RBP10.63□□□□□ -0.71
SCN9A-206ENST00000472119 RAPGEF6Q8TEU7 1601 aa10.63□□□□□ -0.71
SCN9A-206ENST00000472119 DLL1O00548 723 aa10.63□□□□□ -0.71
SCN9A-206ENST00000472119 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
SCN9A-206ENST00000472119 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
SCN9A-206ENST00000472119 ASXL2Q76L83 1435 aa10.62□□□□□ -0.71
SCN9A-206ENST00000472119 TGFB1P01137 390 aa10.62□□□□□ -0.71
SCN9A-206ENST00000472119 ATP1A2P50993 1020 aa10.62□□□□□ -0.71
SCN9A-206ENST00000472119 FAM69CQ0P6D2 419 aa10.62□□□□□ -0.71
SCN9A-206ENST00000472119 TSEN2Q8NCE0 465 aaKnown RBP10.62□□□□□ -0.71
SCN9A-206ENST00000472119 ZBTB42B2RXF5 422 aa10.61□□□□□ -0.71
SCN9A-206ENST00000472119 DHX32Q7L7V1 743 aaKnown RBP10.61□□□□□ -0.71
SCN9A-206ENST00000472119 MRPL18Q9H0U6 180 aaKnown RBP10.61□□□□□ -0.71
SCN9A-206ENST00000472119 SMG9Q9H0W8 520 aaKnown RBP10.61□□□□□ -0.71
SCN9A-206ENST00000472119 MAPKBP1O60336 1514 aa10.6□□□□□ -0.71
SCN9A-206ENST00000472119 ZCCHC11Q5TAX3 1644 aaKnown RBP10.6□□□□□ -0.71
SCN9A-206ENST00000472119 KIAA1324LA8MWY0 1029 aaPredicted RBP10.6□□□□□ -0.71
SCN9A-206ENST00000472119 F8W735 103 aaPredicted RBP10.6□□□□□ -0.71
SCN9A-206ENST00000472119 C21orf2O43822 256 aa10.6□□□□□ -0.71
SCN9A-206ENST00000472119 CLDN10P78369 228 aa10.6□□□□□ -0.71
SCN9A-206ENST00000472119 ALG2Q9H553 416 aa10.6□□□□□ -0.71
SCN9A-206ENST00000472119 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 GSC2O15499 205 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 IGLV1-40P01703 118 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 EPB42P16452 691 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 IER5Q5VY09 327 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 TRPM4Q8TD43 1214 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 TTC9Q92623 222 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 ZFATQ9P243 1243 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 RAXQ9Y2V3 346 aa10.59□□□□□ -0.71
SCN9A-206ENST00000472119 ARID1BQ8NFD5 2236 aaPredicted RBP10.58□□□□□ -0.72
SCN9A-206ENST00000472119 PLEKHD1A6NEE1 506 aa10.58□□□□□ -0.72
SCN9A-206ENST00000472119 M0R2N6 131 aa10.58□□□□□ -0.72
SCN9A-206ENST00000472119 MAP3K6O95382 1288 aa10.58□□□□□ -0.72
SCN9A-206ENST00000472119 HFE2Q6ZVN8 426 aa10.58□□□□□ -0.72
SCN9A-206ENST00000472119 ABCC10Q5T3U5 1492 aa10.57□□□□□ -0.72
SCN9A-206ENST00000472119 ATAD2Q6PL18 1390 aa10.57□□□□□ -0.72
SCN9A-206ENST00000472119 TGFBR3LH3BV60 316 aa10.57□□□□□ -0.72
SCN9A-206ENST00000472119 GLB1P16278 677 aa10.57□□□□□ -0.72
SCN9A-206ENST00000472119 AGGF1Q8N302 714 aaeCLIP10.57□□□□□ -0.72
SCN9A-206ENST00000472119 TMEM130Q8N3G9 435 aa10.57□□□□□ -0.72
SCN9A-206ENST00000472119 C2orf49Q9BVC5 232 aaPredicted RBP10.57□□□□□ -0.72
SCN9A-206ENST00000472119 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
SCN9A-206ENST00000472119 CDK13Q14004 1512 aaKnown RBP10.57□□□□□ -0.72
SCN9A-206ENST00000472119 PCF11O94913 1555 aaKnown RBP10.56□□□□□ -0.72
SCN9A-206ENST00000472119 WDR7Q9Y4E6 1490 aa10.56□□□□□ -0.72
SCN9A-206ENST00000472119 EIF2AK2P19525 551 aaKnown RBP10.56□□□□□ -0.72
SCN9A-206ENST00000472119 TARSP26639 723 aaKnown RBP10.56□□□□□ -0.72
SCN9A-206ENST00000472119 GRNP28799 593 aaKnown RBP10.56□□□□□ -0.72
SCN9A-206ENST00000472119 GPLD1P80108 840 aa10.56□□□□□ -0.72
SCN9A-206ENST00000472119 SCG3Q8WXD2 468 aaKnown RBP10.56□□□□□ -0.72
SCN9A-206ENST00000472119 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
SCN9A-206ENST00000472119 HECW1Q76N89 1606 aa10.55□□□□□ -0.72
SCN9A-206ENST00000472119 RARAP10276 462 aa10.55□□□□□ -0.72
SCN9A-206ENST00000472119 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
SCN9A-206ENST00000472119 STOML1Q9UBI4 398 aa10.55□□□□□ -0.72
SCN9A-206ENST00000472119 CDK11AQ9UQ88 783 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-206ENST00000472119 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 RTN1Q16799 776 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 USP17L2Q6R6M4 530 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 VPS8Q8N3P4 1428 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 IFT43Q96FT9 208 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 DMGDHQ9UI17 866 aaKnown RBP10.54□□□□□ -0.72
SCN9A-206ENST00000472119 BCS1LQ9Y276 419 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
SCN9A-206ENST00000472119 DIP2BQ9P265 1576 aa10.53□□□□□ -0.72
SCN9A-206ENST00000472119 PALM3A6NDB9 673 aaPredicted RBP10.53□□□□□ -0.72
SCN9A-206ENST00000472119 SASH3O75995 380 aa10.53□□□□□ -0.72
SCN9A-206ENST00000472119 GDF6Q6KF10 455 aaPredicted RBP10.53□□□□□ -0.72
SCN9A-206ENST00000472119 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
SCN9A-206ENST00000472119 IDH3AP50213 366 aa10.52□□□□□ -0.73
SCN9A-206ENST00000472119 Q6ZS46 218 aa10.52□□□□□ -0.73
SCN9A-206ENST00000472119 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
SCN9A-206ENST00000472119 ARID4AP29374 1257 aaPredicted RBP10.51□□□□□ -0.73
SCN9A-206ENST00000472119 GRIK1P39086 918 aa10.51□□□□□ -0.73
SCN9A-206ENST00000472119 BCANQ96GW7 911 aa10.51□□□□□ -0.73
SCN9A-206ENST00000472119 KIF13AQ9H1H9 1805 aa10.51□□□□□ -0.73
SCN9A-206ENST00000472119 CCDC18Q5T9S5 1454 aa10.5□□□□□ -0.73
SCN9A-206ENST00000472119 INPP5BP32019 993 aa10.5□□□□□ -0.73
SCN9A-206ENST00000472119 ZDHHC13Q8IUH4 622 aa10.5□□□□□ -0.73
SCN9A-206ENST00000472119 SIX5Q8N196 739 aa10.5□□□□□ -0.73
SCN9A-206ENST00000472119 IL22RA1Q8N6P7 574 aa10.5□□□□□ -0.73
SCN9A-206ENST00000472119 PLD4Q96BZ4 506 aa10.5□□□□□ -0.73
SCN9A-206ENST00000472119 LRRIQ1Q96JM4 1722 aa10.5□□□□□ -0.73
SCN9A-206ENST00000472119 GLI2P10070 1586 aa10.49□□□□□ -0.73
SCN9A-206ENST00000472119 SPINK2P20155 84 aa10.49□□□□□ -0.73
SCN9A-206ENST00000472119 GAS2L2Q8NHY3 880 aa10.49□□□□□ -0.73
SCN9A-206ENST00000472119 UBL7Q96S82 380 aaPredicted RBP10.49□□□□□ -0.73
SCN9A-206ENST00000472119 MKRN1Q9UHC7 482 aaKnown RBP10.49□□□□□ -0.73
SCN9A-206ENST00000472119 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
SCN9A-206ENST00000472119 TROQ12816 1431 aaPredicted RBP10.49□□□□□ -0.73
SCN9A-206ENST00000472119 CD109Q6YHK3 1445 aa10.49□□□□□ -0.73
SCN9A-206ENST00000472119 DHX15O43143 795 aaKnown RBP10.48□□□□□ -0.73
SCN9A-206ENST00000472119 RASA1P20936 1047 aa10.48□□□□□ -0.73
SCN9A-206ENST00000472119 NRLP54845 237 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms