RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 FAM13BQ9NYF5 915 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 RNF112Q9ULX5 631 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 KCNMB2Q9Y691 235 aa8.08□□□□□ -1.12
SCFD1-205ENST00000469043 NLRP13Q86W25 1043 aa8.07□□□□□ -1.12
SCFD1-205ENST00000469043 NSUN5Q96P11 429 aaKnown RBP8.07□□□□□ -1.12
SCFD1-205ENST00000469043 MUC3BQ9H195 1237 aa8.07□□□□□ -1.12
SCFD1-205ENST00000469043 ACIN1Q9UKV3 1341 aaKnown RBP8.06□□□□□ -1.12
SCFD1-205ENST00000469043 HOXD8P13378 290 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-205ENST00000469043 DZIP1LQ8IYY4 767 aaKnown RBP8.06□□□□□ -1.12
SCFD1-205ENST00000469043 PIK3R5Q8WYR1 880 aa8.06□□□□□ -1.12
SCFD1-205ENST00000469043 PRMT3O60678 531 aa8.05□□□□□ -1.12
SCFD1-205ENST00000469043 C16orf46Q6P387 395 aa8.05□□□□□ -1.12
SCFD1-205ENST00000469043 F8W735 103 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-205ENST00000469043 ALX3O95076 343 aa8.04□□□□□ -1.12
SCFD1-205ENST00000469043 COL26A1Q96A83 441 aa8.04□□□□□ -1.12
SCFD1-205ENST00000469043 SPACA7Q96KW9 195 aa8.04□□□□□ -1.12
SCFD1-205ENST00000469043 FNDC3AQ9Y2H6 1198 aaKnown RBP8.04□□□□□ -1.12
SCFD1-205ENST00000469043 PPME1Q9Y570 386 aa8.04□□□□□ -1.12
SCFD1-205ENST00000469043 ELOAQ14241 798 aaKnown RBP8.03□□□□□ -1.12
SCFD1-205ENST00000469043 SETDB1Q15047 1291 aa8.03□□□□□ -1.12
SCFD1-205ENST00000469043 ETFBKMTQ8IXQ9 262 aa8.03□□□□□ -1.12
SCFD1-205ENST00000469043 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
SCFD1-205ENST00000469043 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-205ENST00000469043 UBAP1LF5GYI3 381 aa8.02□□□□□ -1.13
SCFD1-205ENST00000469043 TTC39BQ5VTQ0 682 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-205ENST00000469043 SAP130Q9H0E3 1048 aa8.02□□□□□ -1.13
SCFD1-205ENST00000469043 TRIM33Q9UPN9 1127 aa8.02□□□□□ -1.13
SCFD1-205ENST00000469043 PTCD1O75127 700 aaKnown RBP8.01□□□□□ -1.13
SCFD1-205ENST00000469043 FSTP19883 344 aa8.01□□□□□ -1.13
SCFD1-205ENST00000469043 HYAL2Q12891 473 aa8.01□□□□□ -1.13
SCFD1-205ENST00000469043 OR13H1Q8NG92 308 aa8.01□□□□□ -1.13
SCFD1-205ENST00000469043 GLB1P16278 677 aa8□□□□□ -1.13
SCFD1-205ENST00000469043 OCLNQ16625 522 aa8□□□□□ -1.13
SCFD1-205ENST00000469043 PCMTD2Q9NV79 361 aa8□□□□□ -1.13
SCFD1-205ENST00000469043 KRTAP9-6A0A140TA67 174 aa7.99□□□□□ -1.13
SCFD1-205ENST00000469043 GSC2O15499 205 aa7.99□□□□□ -1.13
SCFD1-205ENST00000469043 SMNDC1O75940 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCFD1-205ENST00000469043 SCNN1AP37088 669 aa7.99□□□□□ -1.13
SCFD1-205ENST00000469043 TRIP4Q15650 581 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-205ENST00000469043 CEP135Q66GS9 1140 aa7.99□□□□□ -1.13
SCFD1-205ENST00000469043 NPM2Q86SE8 214 aaKnown RBP7.99□□□□□ -1.13
SCFD1-205ENST00000469043 RAXQ9Y2V3 346 aa7.99□□□□□ -1.13
SCFD1-205ENST00000469043 LINC01387J3KSC0 135 aa7.98□□□□□ -1.13
SCFD1-205ENST00000469043 ZAP70P43403 619 aa7.98□□□□□ -1.13
SCFD1-205ENST00000469043 FAM69CQ0P6D2 419 aa7.98□□□□□ -1.13
SCFD1-205ENST00000469043 NAA30Q147X3 362 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-205ENST00000469043 MKNK1Q9BUB5 465 aa7.98□□□□□ -1.13
SCFD1-205ENST00000469043 CXXC1Q9P0U4 656 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-205ENST00000469043 STOML1Q9UBI4 398 aa7.98□□□□□ -1.13
SCFD1-205ENST00000469043 ZMIZ1Q9ULJ6 1067 aa7.98□□□□□ -1.13
SCFD1-205ENST00000469043 FAM177BA6PVY3 158 aa7.97□□□□□ -1.13
SCFD1-205ENST00000469043 CDC27P30260 824 aa7.97□□□□□ -1.13
SCFD1-205ENST00000469043 CD68P34810 354 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-205ENST00000469043 TRIM26Q12899 539 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-205ENST00000469043 FAM117BQ6P1L5 589 aa7.97□□□□□ -1.13
SCFD1-205ENST00000469043 Q6ZS46 218 aa7.97□□□□□ -1.13
SCFD1-205ENST00000469043 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.97□□□□□ -1.13
SCFD1-205ENST00000469043 AGGF1Q8N302 714 aaeCLIP7.97□□□□□ -1.13
SCFD1-205ENST00000469043 CEP41Q9BYV8 373 aa7.97□□□□□ -1.13
SCFD1-205ENST00000469043 LACRTQ9GZZ8 138 aa7.97□□□□□ -1.13
SCFD1-205ENST00000469043 STIM2Q9P246 746 aa7.97□□□□□ -1.13
SCFD1-205ENST00000469043 TNFRSF10BO14763 440 aa7.96□□□□□ -1.14
SCFD1-205ENST00000469043 ABTB2Q8N961 1025 aa7.96□□□□□ -1.14
SCFD1-205ENST00000469043 GPR152Q8TDT2 470 aa7.96□□□□□ -1.14
SCFD1-205ENST00000469043 STK32AQ8WU08 396 aa7.96□□□□□ -1.14
SCFD1-205ENST00000469043 DHX15O43143 795 aaKnown RBP7.95□□□□□ -1.14
SCFD1-205ENST00000469043 ATG7O95352 703 aa7.95□□□□□ -1.14
SCFD1-205ENST00000469043 SSTR4P31391 388 aa7.95□□□□□ -1.14
SCFD1-205ENST00000469043 ATP11AP98196 1134 aa7.95□□□□□ -1.14
SCFD1-205ENST00000469043 FAM26DQ5JW98 314 aa7.95□□□□□ -1.14
SCFD1-205ENST00000469043 COL13A1Q5TAT6 717 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-205ENST00000469043 KLHL23Q8NBE8 558 aa7.95□□□□□ -1.14
SCFD1-205ENST00000469043 GALNT11Q8NCW6 608 aa7.95□□□□□ -1.14
SCFD1-205ENST00000469043 ABI2Q9NYB9 513 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-205ENST00000469043 IGLV1-40P01703 118 aa7.94□□□□□ -1.14
SCFD1-205ENST00000469043 CAPN12Q6ZSI9 719 aa7.94□□□□□ -1.14
SCFD1-205ENST00000469043 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
SCFD1-205ENST00000469043 NCAPG2Q86XI2 1143 aa7.94□□□□□ -1.14
SCFD1-205ENST00000469043 UBL7Q96S82 380 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-205ENST00000469043 FSCN2O14926 492 aa7.93□□□□□ -1.14
SCFD1-205ENST00000469043 CDC25BP30305 580 aa7.93□□□□□ -1.14
SCFD1-205ENST00000469043 TXNDC11Q6PKC3 985 aa7.93□□□□□ -1.14
SCFD1-205ENST00000469043 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
SCFD1-205ENST00000469043 RASSF4Q9H2L5 321 aa7.93□□□□□ -1.14
SCFD1-205ENST00000469043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-205ENST00000469043 COBLO75128 1261 aa7.92□□□□□ -1.14
SCFD1-205ENST00000469043 KIF4AO95239 1232 aa7.92□□□□□ -1.14
SCFD1-205ENST00000469043 PTPRAP18433 802 aa7.92□□□□□ -1.14
SCFD1-205ENST00000469043 DUOXA2Q1HG44 320 aa7.92□□□□□ -1.14
SCFD1-205ENST00000469043 UVSSAQ2YD98 709 aa7.92□□□□□ -1.14
SCFD1-205ENST00000469043 RPLP1P05386 114 aaKnown RBP7.91□□□□□ -1.14
SCFD1-205ENST00000469043 CD97P48960 835 aa7.91□□□□□ -1.14
SCFD1-205ENST00000469043 CABP4P57796 275 aa7.91□□□□□ -1.14
SCFD1-205ENST00000469043 SRPK2P78362 688 aaKnown RBP7.91□□□□□ -1.14
SCFD1-205ENST00000469043 TMEM164Q5U3C3 297 aa7.91□□□□□ -1.14
SCFD1-205ENST00000469043 PDE12Q6L8Q7 609 aaKnown RBP7.91□□□□□ -1.14
SCFD1-205ENST00000469043 CLP1Q92989 425 aaKnown RBP7.91□□□□□ -1.14
SCFD1-205ENST00000469043 ZBTB39O15060 712 aa7.9□□□□□ -1.14
SCFD1-205ENST00000469043 WISP1O95388 367 aa7.9□□□□□ -1.14
SCFD1-205ENST00000469043 MCTP1Q6DN14 999 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms