RNA–Protein interactions for RNA: ENST00000464329.1

CD53-202, Transcript of CD53 molecule, humanhuman

TSL 2

Gene CD53, Length 416 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-202ENST00000464329 NR3C2P08235 984 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 LMOD1P29536 600 aaPredicted RBP6.9□□□□□ -1.3
CD53-202ENST00000464329 HTRA3P83110 453 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 NEUROD1Q13562 356 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 MPRIPQ6WCQ1 1025 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 ARHGAP27Q6ZUM4 889 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 TNS4Q8IZW8 715 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 MPNDQ8N594 471 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 PLPP7Q8NBV4 271 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 ZCRB1Q8TBF4 217 aaKnown RBP6.9□□□□□ -1.3
CD53-202ENST00000464329 PDZRN3Q9UPQ7 1066 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 CD2APQ9Y5K6 639 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 WASF2Q9Y6W5 498 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 IGSF1Q8N6C5 1336 aa6.9□□□□□ -1.3
CD53-202ENST00000464329 ERVH48-1M5A8F1 160 aa6.89□□□□□ -1.31
CD53-202ENST00000464329 ATP9BO43861 1147 aa6.89□□□□□ -1.31
CD53-202ENST00000464329 COL13A1Q5TAT6 717 aaPredicted RBP6.89□□□□□ -1.31
CD53-202ENST00000464329 USHBP1Q8N6Y0 703 aa6.89□□□□□ -1.31
CD53-202ENST00000464329 TMPRSS4Q9NRS4 437 aa6.89□□□□□ -1.31
CD53-202ENST00000464329 BCS1LQ9Y276 419 aa6.89□□□□□ -1.31
CD53-202ENST00000464329 PCDHB11Q9Y5F2 797 aa6.89□□□□□ -1.31
CD53-202ENST00000464329 SLIT3O75094 1523 aa6.89□□□□□ -1.31
CD53-202ENST00000464329 ARHGEF28Q8N1W1 1705 aaKnown RBP6.89□□□□□ -1.31
CD53-202ENST00000464329 CHD4Q14839 1912 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 SBF2Q86WG5 1849 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 RGPD3A6NKT7 1758 aaPredicted RBP6.88□□□□□ -1.31
CD53-202ENST00000464329 RGPD4Q7Z3J3 1758 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 SMPD1P17405 629 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 FBLN1P23142 703 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 PRR20EP86478 221 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 PRR20CP86479 221 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 PRR20DP86480 221 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 PRR20BP86481 221 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 PRR20AP86496 221 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 NR5A1Q13285 461 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 NNTQ13423 1086 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 CDCA8Q53HL2 280 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 RNF20Q5VTR2 975 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 FLAD1Q8NFF5 587 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 RAPGEF4Q8WZA2 1011 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 SLC12A5Q9H2X9 1139 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 DOLKQ9UPQ8 538 aa6.88□□□□□ -1.31
CD53-202ENST00000464329 MAFBQ9Y5Q3 323 aaPredicted RBP6.88□□□□□ -1.31
CD53-202ENST00000464329 AKAP12Q02952 1782 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 ANKRD36BQ8N2N9 1353 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 USP17L5A8MUK1 530 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 TOMM70O94826 608 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 OXLD1Q5BKU9 147 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 TRAF7Q6Q0C0 670 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 CCDC116Q8IYX3 515 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 IP6K1Q92551 441 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 NMRK2Q9NPI5 230 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 TOPAZ1Q8N9V7 1692 aa6.87□□□□□ -1.31
CD53-202ENST00000464329 ROCK2O75116 1388 aaKnown RBP6.86□□□□□ -1.31
CD53-202ENST00000464329 A0A0G2JLW4 131 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 GFRA3O60609 400 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
CD53-202ENST00000464329 NCOA4Q13772 614 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 PPP1R26Q5T8A7 1209 aaPredicted RBP6.86□□□□□ -1.31
CD53-202ENST00000464329 USP17L2Q6R6M4 530 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 NFATC2IPQ8NCF5 419 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 HPS1Q92902 700 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 L3MBTL2Q969R5 705 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 COG3Q96JB2 828 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 TERF2IPQ9NYB0 399 aa6.86□□□□□ -1.31
CD53-202ENST00000464329 KAT6BQ8WYB5 2073 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 PIK3C2AO00443 1686 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 NHSQ6T4R5 1651 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.85□□□□□ -1.31
CD53-202ENST00000464329 HMGB2P26583 209 aaKnown RBP6.85□□□□□ -1.31
CD53-202ENST00000464329 SCTRP47872 440 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 MAP7D1Q3KQU3 841 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 DNAJC5GQ8N7S2 189 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 SIN3AQ96ST3 1273 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 CYLDQ9NQC7 956 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 ABCC6O95255 1503 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 COL18A1P39060 1754 aa6.85□□□□□ -1.31
CD53-202ENST00000464329 PALLDQ8WX93 1383 aa6.84□□□□□ -1.31
CD53-202ENST00000464329 FAM187AA6NFU0 413 aa6.84□□□□□ -1.31
CD53-202ENST00000464329 PPM1GO15355 546 aaPredicted RBP6.84□□□□□ -1.31
CD53-202ENST00000464329 MMP10P09238 476 aa6.84□□□□□ -1.31
CD53-202ENST00000464329 HOXC9P31274 260 aa6.84□□□□□ -1.31
CD53-202ENST00000464329 DHX9Q08211 1270 aaKnown RBP6.84□□□□□ -1.31
CD53-202ENST00000464329 RRS1Q15050 365 aaKnown RBP6.84□□□□□ -1.31
CD53-202ENST00000464329 NBPF6Q5VWK0 638 aa6.84□□□□□ -1.31
CD53-202ENST00000464329 ITPKCQ96DU7 683 aa6.84□□□□□ -1.31
CD53-202ENST00000464329 NBPF4Q96M43 638 aa6.84□□□□□ -1.31
CD53-202ENST00000464329 RRAGCQ9HB90 399 aa6.84□□□□□ -1.31
CD53-202ENST00000464329 PAPPAQ13219 1627 aa6.83□□□□□ -1.32
CD53-202ENST00000464329 BTAF1O14981 1849 aa6.83□□□□□ -1.32
CD53-202ENST00000464329 MAP3K19Q56UN5 1328 aa6.83□□□□□ -1.32
CD53-202ENST00000464329 RGPD5Q99666 1765 aa6.83□□□□□ -1.32
CD53-202ENST00000464329 ZIC2O95409 532 aaPredicted RBP6.83□□□□□ -1.32
CD53-202ENST00000464329 WDR4P57081 412 aaKnown RBP6.83□□□□□ -1.32
CD53-202ENST00000464329 EML3Q32P44 896 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms