RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ZNF296Q8WUU4 475 aaPredicted RBP7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 WNT2BQ93097 391 aa7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 LTV1Q96GA3 475 aaPredicted RBP7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 NBPF4Q96M43 638 aa7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 PGAP2Q9UHJ9 254 aa7.76□□□□□ -1.17
SBDSP1-204ENST00000453858 NRXN2Q9P2S2 1712 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 SCN11AQ9UI33 1791 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 EPS15P42566 896 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 PTPN5P54829 565 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 ANKK1Q8NFD2 765 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 NLRP7Q8WX94 980 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 SYNGAP1Q96PV0 1343 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 CFAP54Q96N23 3096 aa7.75□□□□□ -1.17
SBDSP1-204ENST00000453858 SCNN1DP51172 638 aa7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 USP46P62068 366 aa7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 NFIXQ14938 502 aa7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 NOM1Q5C9Z4 860 aaKnown RBP7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 USP50Q70EL3 339 aaPredicted RBP7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 SAMD7Q7Z3H4 446 aa7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 LTN1O94822 1766 aa7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 PAPPA2Q9BXP8 1791 aa7.74□□□□□ -1.17
SBDSP1-204ENST00000453858 WDFY4Q6ZS81 3184 aa7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 AFDNP55196 1824 aaKnown RBP7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 CARMIL3Q8ND23 1372 aa7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 BICDL1Q6ZP65 573 aa7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 NUTM1Q86Y26 1132 aa7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 RDH13Q8NBN7 331 aa7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 PRR14Q9BWN1 585 aa7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 GLIS2Q9BZE0 524 aaPredicted RBP7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 RBBP6Q7Z6E9 1792 aaKnown RBP7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 PCDH11XQ9BZA7 1347 aa7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 PCDH11YQ9BZA8 1340 aa7.73□□□□□ -1.17
SBDSP1-204ENST00000453858 AKAP11Q9UKA4 1901 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 USP34Q70CQ2 3546 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 PKD1L2Q7Z442 2459 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 SERPINB2P05120 415 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 HUNKP57058 714 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 SH3D19Q5HYK7 790 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 RGMBQ6NW40 437 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 CCDC24Q8N4L8 307 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 MTMR10Q9NXD2 777 aa7.72□□□□□ -1.17
SBDSP1-204ENST00000453858 RGPD2P0DJD1 1756 aa7.71□□□□□ -1.17
SBDSP1-204ENST00000453858 SLX4Q8IY92 1834 aa7.71□□□□□ -1.17
SBDSP1-204ENST00000453858 ZNF831Q5JPB2 1677 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 SOWAHBA6NEL2 793 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 GJA5P36382 358 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 GCGRP47871 477 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 SKIV2LQ15477 1246 aaKnown RBP7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 KMT5BQ4FZB7 885 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 GRIPAP1Q4V328 841 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 NME9Q86XW9 330 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 DEFB123Q8N688 67 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 ZNF622Q969S3 477 aaKnown RBP eCLIP7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 ZNF277Q9NRM2 450 aaPredicted RBP7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 HDAC9Q9UKV0 1011 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 CACNA1GO43497 2377 aa7.71□□□□□ -1.18
SBDSP1-204ENST00000453858 COL5A3P25940 1745 aaPredicted RBP7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 A0A1W2PPC1 479 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 HOXC9P31274 260 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 USPL1Q5W0Q7 1092 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 INTS5Q6P9B9 1019 aaKnown RBP7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 DLK2Q6UY11 383 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 NYAP1Q6ZVC0 841 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 Q7L0L9 218 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 USHBP1Q8N6Y0 703 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 ARMC5Q96C12 935 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 PCMTD1Q96MG8 357 aaPredicted RBP7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 MPHOSPH9Q99550 1183 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 PDZRN3Q9UPQ7 1066 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 C5orf42Q9H799 3197 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 XIRP2A4UGR9 3374 aa7.7□□□□□ -1.18
SBDSP1-204ENST00000453858 LAMB4A4D0S4 1761 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 GPR25O00155 361 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 KDM4AO75164 1064 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 TBC1D8O95759 1140 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 SLC10A3P09131 477 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 PPP4CP60510 307 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 TUSC1Q2TAM9 212 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 PRPF40BQ6NWY9 871 aaKnown RBP7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 RAPGEF4Q8WZA2 1011 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 BRIP1Q9BX63 1249 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 TMOD3Q9NYL9 352 aa7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 TSR3Q9UJK0 312 aaKnown RBP7.69□□□□□ -1.18
SBDSP1-204ENST00000453858 CHD8Q9HCK8 2581 aa7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 CACNA1SQ13698 1873 aa7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 MUC6Q6W4X9 2439 aa7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 TATP17735 454 aaPredicted RBP7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 CRKLP46109 303 aaKnown RBP7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 HIRAP54198 1017 aaPredicted RBP7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 FKBP4Q02790 459 aaKnown RBP eCLIP7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 SOGA3Q5TF21 947 aa7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 ERICH6Q7L0X2 663 aa7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 SPIRE2Q8WWL2 714 aa7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 R3HDMLQ9H3Y0 253 aa7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
SBDSP1-204ENST00000453858 ZFHX4Q86UP3 3567 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms