RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 TTC39BQ5VTQ0 682 aaPredicted RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 LMBRD2Q68DH5 695 aaPredicted RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 FBXO33Q7Z6M2 555 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 LCA5Q86VQ0 697 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 CCAR1Q8IX12 1150 aaKnown RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 CCDC26Q8TAB7 109 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 BHMTQ93088 406 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 IL17RAQ96F46 866 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 BEGAINQ9BUH8 593 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 ODF2LQ9ULJ1 636 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 NOL7Q9UMY1 257 aaKnown RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 PHLDB1Q86UU1 1377 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 PBRM1Q86U86 1689 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 ZNF24P17028 368 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 SCNN1AP37088 669 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 HIC1Q14526 733 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 PDCD2Q16342 344 aaPredicted RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 TSGA10IPQ3SY00 556 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 PCGF5Q86SE9 256 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 TMEM110Q86TL2 294 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 TRIM42Q8IWZ5 723 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 GABPB2Q8TAK5 448 aaPredicted RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 CENPTQ96BT3 561 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 GBP4Q96PP9 640 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 FEZ1Q99689 392 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 TINF2Q9BSI4 451 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 SLC7A5P2Q9GIP4 190 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 QTRT2Q9H974 415 aaKnown RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 PCDH12Q9NPG4 1184 aa5.82□□□□□ -1.48
EPHA3-202ENST00000452448 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 TFIP11Q9UBB9 837 aaKnown RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 MRPL42Q9Y6G3 142 aaKnown RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 V9GYY5 206 aaPredicted RBP5.82□□□□□ -1.48
EPHA3-202ENST00000452448 PRG4Q92954 1404 aaPredicted RBP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 FYCO1Q9BQS8 1478 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 NSUN2Q08J23 767 aaKnown RBP eCLIP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 AGAP9Q5VTM2 703 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 RBM12BQ8IXT5 1001 aaKnown RBP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 STK32AQ8WU08 396 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 FAM81BQ96LP2 452 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 UCN2Q96RP3 112 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 CENPOQ9BU64 300 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 TRIM6Q9C030 488 aaPredicted RBP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 ABCA10Q8WWZ4 1543 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 PCF11O94913 1555 aaKnown RBP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 PABPN1LA6NDY0 278 aaKnown RBP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 F8VZ95 297 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 TRIM37O94972 964 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 HOXA10P31260 410 aaPredicted RBP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 GJA8P48165 433 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 C10orf62Q5T681 223 aaPredicted RBP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 EFCAB2Q5VUJ9 269 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 FILIP1Q7Z7B0 1213 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 ARHGEF25Q86VW2 580 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 RELL1Q8IUW5 271 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 HLA-CQ95604 372 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 PLEKHG4BQ96PX9 1271 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 CRACR2AQ9BSW2 395 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 ZHX3Q9H4I2 956 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 HOXC10Q9NYD6 342 aa5.81□□□□□ -1.48
EPHA3-202ENST00000452448 SPAG9O60271 1321 aaKnown RBP5.81□□□□□ -1.48
EPHA3-202ENST00000452448 SASH1O94885 1247 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 S100BP04271 92 aaPredicted RBP5.8□□□□□ -1.48
EPHA3-202ENST00000452448 PTGER2P43116 358 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 RPS6KA3P51812 740 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 ZNF131P52739 623 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 TMEM164Q5U3C3 297 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 FAAH2Q6GMR7 532 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 CCDC174Q6PII3 467 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 ANKRD13DQ6ZTN6 518 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 MYOCDQ8IZQ8 938 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 KIAA1958Q8N8K9 716 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 ZNF454Q8N9F8 522 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 FAM163AQ96GL9 167 aaPredicted RBP5.8□□□□□ -1.48
EPHA3-202ENST00000452448 KCNH8Q96L42 1107 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 RMDN2Q96LZ7 410 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 SH3GL3Q99963 347 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 IFT57Q9NWB7 429 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 COMMD8Q9NX08 183 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 FGD5Q6ZNL6 1462 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 HOXD10P28358 340 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 TRIM29Q14134 588 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 SEPT2Q15019 361 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 COBLL1Q53SF7 1204 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 SFMBT2Q5VUG0 894 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 METTL3Q86U44 580 aaKnown RBP5.8□□□□□ -1.48
EPHA3-202ENST00000452448 EFCAB13Q8IY85 973 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 ZNF710Q8N1W2 664 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 DRAXINQ8NBI3 349 aaPredicted RBP5.8□□□□□ -1.48
EPHA3-202ENST00000452448 DHX36Q9H2U1 1008 aaKnown RBP5.8□□□□□ -1.48
EPHA3-202ENST00000452448 IKBKGQ9Y6K9 419 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 MORC2Q9Y6X9 1032 aaPredicted RBP5.8□□□□□ -1.48
EPHA3-202ENST00000452448 CASKIN1Q8WXD9 1431 aa5.8□□□□□ -1.48
EPHA3-202ENST00000452448 BRD4O60885 1362 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 FMNL1O95466 1100 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 ZBED6P86452 979 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 DHX8Q14562 1220 aaKnown RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 PKN1Q16512 942 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms