RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 CHMP4AQ9BY43 222 aa9.62□□□□□ -0.87
COPS3-203ENST00000439936 FHDC1Q9C0D6 1143 aaPredicted RBP9.62□□□□□ -0.87
COPS3-203ENST00000439936 PHAXQ9H814 394 aaKnown RBP9.62□□□□□ -0.87
COPS3-203ENST00000439936 PARP3Q9Y6F1 533 aa9.62□□□□□ -0.87
COPS3-203ENST00000439936 NUP98P52948 1817 aa9.61□□□□□ -0.87
COPS3-203ENST00000439936 MAP3K15Q6ZN16 1313 aa9.61□□□□□ -0.87
COPS3-203ENST00000439936 POLRMTO00411 1230 aaKnown RBP9.61□□□□□ -0.87
COPS3-203ENST00000439936 SERPINB2P05120 415 aa9.61□□□□□ -0.87
COPS3-203ENST00000439936 DDR1Q08345 913 aa9.61□□□□□ -0.87
COPS3-203ENST00000439936 TTC13Q8NBP0 860 aa9.61□□□□□ -0.87
COPS3-203ENST00000439936 TATDN2Q93075 761 aa9.61□□□□□ -0.87
COPS3-203ENST00000439936 HYPKQ9NX55 129 aa9.61□□□□□ -0.87
COPS3-203ENST00000439936 HPS5Q9UPZ3 1129 aa9.61□□□□□ -0.87
COPS3-203ENST00000439936 PTGDRQ13258 359 aa9.6□□□□□ -0.87
COPS3-203ENST00000439936 TRAF7Q6Q0C0 670 aa9.6□□□□□ -0.87
COPS3-203ENST00000439936 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
COPS3-203ENST00000439936 ZBTB3Q9H5J0 574 aa9.6□□□□□ -0.87
COPS3-203ENST00000439936 CACNA1FO60840 1977 aa9.6□□□□□ -0.87
COPS3-203ENST00000439936 SRCAPQ6ZRS2 3230 aa9.59□□□□□ -0.87
COPS3-203ENST00000439936 GFRA3O60609 400 aa9.59□□□□□ -0.87
COPS3-203ENST00000439936 KIF6Q6ZMV9 814 aa9.59□□□□□ -0.87
COPS3-203ENST00000439936 SAMD7Q7Z3H4 446 aa9.59□□□□□ -0.87
COPS3-203ENST00000439936 SETDB2Q96T68 719 aa9.59□□□□□ -0.87
COPS3-203ENST00000439936 PNMA3Q9UL41 463 aa9.59□□□□□ -0.87
COPS3-203ENST00000439936 ZNF652Q9Y2D9 606 aa9.59□□□□□ -0.87
COPS3-203ENST00000439936 CD2APQ9Y5K6 639 aa9.59□□□□□ -0.87
COPS3-203ENST00000439936 AFDNP55196 1824 aaKnown RBP9.59□□□□□ -0.87
COPS3-203ENST00000439936 NUDT18Q6ZVK8 323 aa9.58□□□□□ -0.88
COPS3-203ENST00000439936 G2E3Q7L622 706 aa9.58□□□□□ -0.88
COPS3-203ENST00000439936 ZNF34Q8IZ26 560 aa9.58□□□□□ -0.88
COPS3-203ENST00000439936 PLBD2Q8NHP8 589 aa9.58□□□□□ -0.88
COPS3-203ENST00000439936 STK31Q9BXU1 1019 aa9.58□□□□□ -0.88
COPS3-203ENST00000439936 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
COPS3-203ENST00000439936 BCORQ6W2J9 1755 aa9.57□□□□□ -0.88
COPS3-203ENST00000439936 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
COPS3-203ENST00000439936 PPP4CP60510 307 aa9.57□□□□□ -0.88
COPS3-203ENST00000439936 TCIRG1Q13488 830 aa9.57□□□□□ -0.88
COPS3-203ENST00000439936 PADI6Q6TGC4 694 aa9.57□□□□□ -0.88
COPS3-203ENST00000439936 CCDC24Q8N4L8 307 aa9.57□□□□□ -0.88
COPS3-203ENST00000439936 NLGN2Q8NFZ4 835 aa9.57□□□□□ -0.88
COPS3-203ENST00000439936 A0A0G2JLW4 131 aa9.56□□□□□ -0.88
COPS3-203ENST00000439936 FECHP22830 423 aa9.56□□□□□ -0.88
COPS3-203ENST00000439936 GPTP24298 496 aa9.56□□□□□ -0.88
COPS3-203ENST00000439936 TGFB2P61812 414 aa9.56□□□□□ -0.88
COPS3-203ENST00000439936 SUSD4Q5VX71 490 aa9.56□□□□□ -0.88
COPS3-203ENST00000439936 TPTE2Q6XPS3 522 aa9.56□□□□□ -0.88
COPS3-203ENST00000439936 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
COPS3-203ENST00000439936 SCN7AQ01118 1682 aa9.56□□□□□ -0.88
COPS3-203ENST00000439936 KCNA3P22001 575 aa9.55□□□□□ -0.88
COPS3-203ENST00000439936 PRR5LQ6MZQ0 368 aa9.55□□□□□ -0.88
COPS3-203ENST00000439936 KSR2Q6VAB6 950 aa9.55□□□□□ -0.88
COPS3-203ENST00000439936 NBPF5PQ86XG9 351 aaPredicted RBP9.55□□□□□ -0.88
COPS3-203ENST00000439936 RBM27Q9P2N5 1060 aaKnown RBP9.55□□□□□ -0.88
COPS3-203ENST00000439936 KIF13BQ9NQT8 1826 aa9.55□□□□□ -0.88
COPS3-203ENST00000439936 NRXN2Q9P2S2 1712 aa9.55□□□□□ -0.88
COPS3-203ENST00000439936 CARMIL3Q8ND23 1372 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 PI4KAP2A4QPH2 592 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 ATP5J2-PTCD1G3V325 749 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 NRG2O14511 850 aaPredicted RBP9.54□□□□□ -0.88
COPS3-203ENST00000439936 DDX58O95786 925 aaKnown RBP9.54□□□□□ -0.88
COPS3-203ENST00000439936 DPEP1P16444 411 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 FLIIQ13045 1269 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 HIC1Q14526 733 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 HSP90AB3PQ58FF7 597 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 PI4KAP1Q8N8J0 262 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 ISCA1Q9BUE6 129 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
COPS3-203ENST00000439936 ZBED9Q6R2W3 1325 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 UBN2Q6ZU65 1347 aa9.54□□□□□ -0.88
COPS3-203ENST00000439936 N4BP2Q86UW6 1770 aaPredicted RBP9.54□□□□□ -0.88
COPS3-203ENST00000439936 ATP10DQ9P241 1426 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 NPHP1O15259 732 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 GTF2E1P29083 439 aaPredicted RBP9.53□□□□□ -0.88
COPS3-203ENST00000439936 CHRNA5P30532 468 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 TRIM28Q13263 835 aaKnown RBP9.53□□□□□ -0.88
COPS3-203ENST00000439936 PARP10Q53GL7 1025 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 PPP1R42Q7Z4L9 355 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 NLRP10Q86W26 655 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 NUTM1Q86Y26 1132 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 SYNE4Q8N205 404 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 SSH1Q8WYL5 1049 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 MYD88Q99836 296 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 METTL22Q9BUU2 404 aaPredicted RBP9.53□□□□□ -0.88
COPS3-203ENST00000439936 MAP3K2Q9Y2U5 619 aa9.53□□□□□ -0.88
COPS3-203ENST00000439936 C10orf71Q711Q0 1435 aa9.52□□□□□ -0.88
COPS3-203ENST00000439936 NTSR2O95665 410 aa9.52□□□□□ -0.88
COPS3-203ENST00000439936 CT47B1P0C2W7 299 aaPredicted RBP9.52□□□□□ -0.88
COPS3-203ENST00000439936 ST5P78524 1137 aa9.52□□□□□ -0.88
COPS3-203ENST00000439936 FKBP5Q13451 457 aaPredicted RBP9.52□□□□□ -0.88
COPS3-203ENST00000439936 ALDH1L2Q3SY69 923 aa9.52□□□□□ -0.88
COPS3-203ENST00000439936 ERFEQ4G0M1 354 aa9.52□□□□□ -0.88
COPS3-203ENST00000439936 UTP14AQ9BVJ6 771 aaKnown RBP9.52□□□□□ -0.88
COPS3-203ENST00000439936 NYXQ9GZU5 481 aa9.52□□□□□ -0.88
COPS3-203ENST00000439936 SLC24A3Q9HC58 644 aa9.52□□□□□ -0.88
COPS3-203ENST00000439936 WWC3Q9ULE0 1092 aa9.52□□□□□ -0.88
COPS3-203ENST00000439936 ANKRD31Q8N7Z5 1873 aa9.52□□□□□ -0.89
COPS3-203ENST00000439936 ANKRD36CQ5JPF3 1778 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms