RNA–Protein interactions for RNA: ENST00000439890.3

NANOGP9-201, Transcript of Nanog homeobox pseudogene 9, humanhuman

BASIC

Gene NANOGP9, Length 892 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP9-201ENST00000439890 SLAIN2Q9P270 581 aa9.41□□□□□ -0.9
NANOGP9-201ENST00000439890 SEPT3Q9UH03 358 aa9.41□□□□□ -0.9
NANOGP9-201ENST00000439890 USP21Q9UK80 565 aa9.41□□□□□ -0.9
NANOGP9-201ENST00000439890 FNDC3AQ9Y2H6 1198 aaKnown RBP9.41□□□□□ -0.9
NANOGP9-201ENST00000439890 CFTRP13569 1480 aa9.4□□□□□ -0.9
NANOGP9-201ENST00000439890 PRDM2Q13029 1718 aa9.4□□□□□ -0.9
NANOGP9-201ENST00000439890 C9orf172C9J069 976 aa9.4□□□□□ -0.9
NANOGP9-201ENST00000439890 J3QW42 95 aa9.4□□□□□ -0.9
NANOGP9-201ENST00000439890 PLD4Q96BZ4 506 aa9.4□□□□□ -0.9
NANOGP9-201ENST00000439890 GDF6Q6KF10 455 aaPredicted RBP9.39□□□□□ -0.91
NANOGP9-201ENST00000439890 SHISA2Q6UWI4 295 aa9.39□□□□□ -0.91
NANOGP9-201ENST00000439890 FMR1NBQ8N0W7 255 aaPredicted RBP9.39□□□□□ -0.91
NANOGP9-201ENST00000439890 CADPSQ9ULU8 1353 aa9.38□□□□□ -0.91
NANOGP9-201ENST00000439890 LOC102724428A0A0B4J2F2 783 aa9.38□□□□□ -0.91
NANOGP9-201ENST00000439890 SIK1P57059 783 aa9.38□□□□□ -0.91
NANOGP9-201ENST00000439890 TTC39BQ5VTQ0 682 aaPredicted RBP9.38□□□□□ -0.91
NANOGP9-201ENST00000439890 SEMA6BQ9H3T3 888 aa9.38□□□□□ -0.91
NANOGP9-201ENST00000439890 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
NANOGP9-201ENST00000439890 SOX18P35713 384 aa9.37□□□□□ -0.91
NANOGP9-201ENST00000439890 NRG1Q02297 640 aaPredicted RBP9.37□□□□□ -0.91
NANOGP9-201ENST00000439890 ZBTB39O15060 712 aa9.36□□□□□ -0.91
NANOGP9-201ENST00000439890 SELPP16109 830 aa9.36□□□□□ -0.91
NANOGP9-201ENST00000439890 SCNN1AP37088 669 aa9.36□□□□□ -0.91
NANOGP9-201ENST00000439890 GRIK5Q16478 980 aa9.36□□□□□ -0.91
NANOGP9-201ENST00000439890 TTC16Q8NEE8 873 aa9.36□□□□□ -0.91
NANOGP9-201ENST00000439890 SPACA7Q96KW9 195 aa9.36□□□□□ -0.91
NANOGP9-201ENST00000439890 C1orf115Q9H7X2 142 aa9.36□□□□□ -0.91
NANOGP9-201ENST00000439890 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
NANOGP9-201ENST00000439890 MBTPS1Q14703 1052 aa9.35□□□□□ -0.91
NANOGP9-201ENST00000439890 ATCAYQ86WG3 371 aa9.35□□□□□ -0.91
NANOGP9-201ENST00000439890 DTWD1Q8N5C7 304 aa9.35□□□□□ -0.91
NANOGP9-201ENST00000439890 HELQQ8TDG4 1101 aa9.35□□□□□ -0.91
NANOGP9-201ENST00000439890 TTC9Q92623 222 aa9.35□□□□□ -0.91
NANOGP9-201ENST00000439890 ABCC8Q09428 1581 aa9.34□□□□□ -0.91
NANOGP9-201ENST00000439890 LOC100996750A0A140TA64 210 aa9.34□□□□□ -0.91
NANOGP9-201ENST00000439890 PCSK2P16519 638 aa9.34□□□□□ -0.91
NANOGP9-201ENST00000439890 HYAL2Q12891 473 aa9.34□□□□□ -0.91
NANOGP9-201ENST00000439890 TXNRD3Q86VQ6 643 aa9.34□□□□□ -0.91
NANOGP9-201ENST00000439890 LENG1Q96BZ8 264 aaPredicted RBP9.34□□□□□ -0.91
NANOGP9-201ENST00000439890 NUDT16Q96DE0 195 aaKnown RBP9.34□□□□□ -0.91
NANOGP9-201ENST00000439890 KRTAP4-6Q9BYQ5 205 aa9.34□□□□□ -0.91
NANOGP9-201ENST00000439890 LAMC3Q9Y6N6 1575 aa9.33□□□□□ -0.92
NANOGP9-201ENST00000439890 WRNQ14191 1432 aaPredicted RBP eCLIP9.33□□□□□ -0.92
NANOGP9-201ENST00000439890 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
NANOGP9-201ENST00000439890 ADGRE1Q14246 886 aa9.33□□□□□ -0.92
NANOGP9-201ENST00000439890 ZNF438Q7Z4V0 828 aa9.33□□□□□ -0.92
NANOGP9-201ENST00000439890 IL22RA1Q8N6P7 574 aa9.33□□□□□ -0.92
NANOGP9-201ENST00000439890 OR13H1Q8NG92 308 aa9.33□□□□□ -0.92
NANOGP9-201ENST00000439890 ABI2Q9NYB9 513 aaPredicted RBP9.33□□□□□ -0.92
NANOGP9-201ENST00000439890 HOXD8P13378 290 aaPredicted RBP9.32□□□□□ -0.92
NANOGP9-201ENST00000439890 AAMPQ13685 434 aa9.32□□□□□ -0.92
NANOGP9-201ENST00000439890 FBXO11Q86XK2 927 aa9.32□□□□□ -0.92
NANOGP9-201ENST00000439890 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
NANOGP9-201ENST00000439890 EDEM1Q92611 657 aa9.32□□□□□ -0.92
NANOGP9-201ENST00000439890 TRIM33Q9UPN9 1127 aa9.32□□□□□ -0.92
NANOGP9-201ENST00000439890 MTMR7Q9Y216 660 aa9.32□□□□□ -0.92
NANOGP9-201ENST00000439890 TMEM88BA6NKF7 163 aa9.31□□□□□ -0.92
NANOGP9-201ENST00000439890 C8orf34Q49A92 452 aa9.31□□□□□ -0.92
NANOGP9-201ENST00000439890 NOM1Q5C9Z4 860 aaKnown RBP9.31□□□□□ -0.92
NANOGP9-201ENST00000439890 FAM177BA6PVY3 158 aa9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 SMNDC1O75940 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 RPLP1P05386 114 aaKnown RBP9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 MPSTP25325 297 aa9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 ATP11AP98196 1134 aa9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 MTMR3Q13615 1198 aa9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 RSPO4Q2I0M5 234 aaPredicted RBP9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 NCAPG2Q86XI2 1143 aa9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 LACRTQ9GZZ8 138 aa9.3□□□□□ -0.92
NANOGP9-201ENST00000439890 SSFA2P28290 1259 aa9.29□□□□□ -0.92
NANOGP9-201ENST00000439890 COL13A1Q5TAT6 717 aaPredicted RBP9.29□□□□□ -0.92
NANOGP9-201ENST00000439890 TP53INP1Q96A56 240 aa9.29□□□□□ -0.92
NANOGP9-201ENST00000439890 ELP3Q9H9T3 547 aa9.29□□□□□ -0.92
NANOGP9-201ENST00000439890 KANSL3Q9P2N6 904 aa9.29□□□□□ -0.92
NANOGP9-201ENST00000439890 CARNS1A5YM72 827 aa9.28□□□□□ -0.92
NANOGP9-201ENST00000439890 DEAF1O75398 565 aaPredicted RBP9.28□□□□□ -0.92
NANOGP9-201ENST00000439890 ABL1P00519 1130 aa9.28□□□□□ -0.92
NANOGP9-201ENST00000439890 CYP2E1P05181 493 aaPredicted RBP9.28□□□□□ -0.92
NANOGP9-201ENST00000439890 EIF1AXP47813 144 aaKnown RBP9.28□□□□□ -0.92
NANOGP9-201ENST00000439890 PDE12Q6L8Q7 609 aaKnown RBP9.28□□□□□ -0.92
NANOGP9-201ENST00000439890 ARID3AQ99856 593 aa9.28□□□□□ -0.92
NANOGP9-201ENST00000439890 TMEM63CQ9P1W3 806 aa9.28□□□□□ -0.92
NANOGP9-201ENST00000439890 TOP2BQ02880 1626 aa9.27□□□□□ -0.92
NANOGP9-201ENST00000439890 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.92
NANOGP9-201ENST00000439890 DYRK3O43781 588 aa9.27□□□□□ -0.93
NANOGP9-201ENST00000439890 CDC25BP30305 580 aa9.27□□□□□ -0.93
NANOGP9-201ENST00000439890 IREB2P48200 963 aaKnown RBP9.27□□□□□ -0.93
NANOGP9-201ENST00000439890 IGF2-ASQ6U949 168 aa9.27□□□□□ -0.93
NANOGP9-201ENST00000439890 SYNJ1O43426 1573 aa9.27□□□□□ -0.93
NANOGP9-201ENST00000439890 PDGFAP04085 211 aa9.26□□□□□ -0.93
NANOGP9-201ENST00000439890 NKAPLQ5M9Q1 402 aa9.26□□□□□ -0.93
NANOGP9-201ENST00000439890 ALKBH2Q6NS38 261 aa9.26□□□□□ -0.93
NANOGP9-201ENST00000439890 DCAF11Q8TEB1 546 aa9.26□□□□□ -0.93
NANOGP9-201ENST00000439890 WFDC12Q8WWY7 111 aa9.26□□□□□ -0.93
NANOGP9-201ENST00000439890 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
NANOGP9-201ENST00000439890 PPME1Q9Y570 386 aa9.26□□□□□ -0.93
NANOGP9-201ENST00000439890 FANCD2Q9BXW9 1451 aa9.26□□□□□ -0.93
NANOGP9-201ENST00000439890 PDS5BQ9NTI5 1447 aa9.25□□□□□ -0.93
NANOGP9-201ENST00000439890 NESP48681 1621 aa9.25□□□□□ -0.93
NANOGP9-201ENST00000439890 A6NHS1 94 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms