RNA–Protein interactions for RNA: ENST00000422143.2

TRBV29-1-201, Transcript of T cell receptor beta variable 29-1, humanhuman

APPRIS P1 BASIC

Gene TRBV29-1, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV29-1-201ENST00000422143 ZNF516Q92618 1163 aa6.92□□□□□ -1.3
TRBV29-1-201ENST00000422143 SYTL4Q96C24 671 aaPredicted RBP6.92□□□□□ -1.3
TRBV29-1-201ENST00000422143 DCAF5Q96JK2 942 aa6.92□□□□□ -1.3
TRBV29-1-201ENST00000422143 ARHGAP9Q9BRR9 750 aa6.92□□□□□ -1.3
TRBV29-1-201ENST00000422143 LRRC4BQ9NT99 713 aa6.92□□□□□ -1.3
TRBV29-1-201ENST00000422143 PODXL2Q9NZ53 605 aa6.92□□□□□ -1.3
TRBV29-1-201ENST00000422143 CEP126Q9P2H0 1117 aa6.92□□□□□ -1.3
TRBV29-1-201ENST00000422143 PLEKHG2Q9H7P9 1386 aa6.92□□□□□ -1.3
TRBV29-1-201ENST00000422143 PATL2C9JE40 543 aaKnown RBP6.91□□□□□ -1.3
TRBV29-1-201ENST00000422143 RNMTO43148 476 aaKnown RBP6.91□□□□□ -1.3
TRBV29-1-201ENST00000422143 DCTN1Q14203 1278 aa6.91□□□□□ -1.3
TRBV29-1-201ENST00000422143 SH3BP5LQ7L8J4 393 aa6.91□□□□□ -1.3
TRBV29-1-201ENST00000422143 CCDC146Q8IYE0 955 aa6.91□□□□□ -1.3
TRBV29-1-201ENST00000422143 SLC4A9Q96Q91 983 aa6.91□□□□□ -1.3
TRBV29-1-201ENST00000422143 ATG3Q9NT62 314 aa6.91□□□□□ -1.3
TRBV29-1-201ENST00000422143 ASAP1Q9ULH1 1129 aa6.91□□□□□ -1.3
TRBV29-1-201ENST00000422143 SENP3-EIF4A1A0A087X0R7 540 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 ERVV-2B6SEH9 535 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 BAG6P46379 1132 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 SF3B2Q13435 895 aaKnown RBP6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 TXNRD1Q16881 649 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 SLFNL1Q499Z3 407 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 C1orf141Q5JVX7 400 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 PTCRAQ6ISU1 281 aaPredicted RBP6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 MCM10Q7L590 875 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 ZBTB33Q86T24 672 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 BPHLQ86WA6 291 aaPredicted RBP6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 ADAM32Q8TC27 787 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 OCSTAMPQ9BR26 566 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 THUMPD2Q9BTF0 503 aaKnown RBP6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 VRTNQ9H8Y1 702 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 HCSTQ9UBK5 93 aa6.9□□□□□ -1.3
TRBV29-1-201ENST00000422143 SHANK3Q9BYB0 1731 aa6.9□□□□□ -1.31
TRBV29-1-201ENST00000422143 GNAT3A8MTJ3 354 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 KCNQ3O43525 872 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 HSP90AB1P08238 724 aaKnown RBP6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 SKIP12755 728 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 CABP4P57796 275 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 SLC39A6Q13433 755 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 ELOAQ14241 798 aaKnown RBP6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 NFE2L2Q16236 605 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 MAP7D1Q3KQU3 841 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 DIEXFQ68CQ4 756 aaKnown RBP6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 SH3RF1Q7Z6J0 888 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 PHTF2Q8N3S3 785 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 GAS2L2Q8NHY3 880 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 SLC52A2Q9HAB3 445 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 TMOD3Q9NYL9 352 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 RRP7AQ9Y3A4 280 aaKnown RBP6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 PCDHB9Q9Y5E1 797 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 WNK3Q9BYP7 1800 aa6.89□□□□□ -1.31
TRBV29-1-201ENST00000422143 PKD1L3Q7Z443 1732 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 CEMIPQ8WUJ3 1361 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 MAP3K5Q99683 1374 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 TMPOP42166 694 aaKnown RBP6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 KCNC4Q03721 635 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 ITPK1Q13572 414 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 WDR43Q15061 677 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 SMIM5Q71RC9 77 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 AMIGO3Q86WK7 504 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 DZIP3Q86Y13 1208 aaKnown RBP6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 RUNDC1Q96C34 613 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 PDGFDQ9GZP0 370 aaPredicted RBP6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 PCDH10Q9P2E7 1040 aa6.88□□□□□ -1.31
TRBV29-1-201ENST00000422143 PALLDQ8WX93 1383 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 LOC102724428A0A0B4J2F2 783 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 USP17L3A6NCW0 530 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 USP17L4A6NCW7 530 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 PIK3CDO00329 1044 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 APAF1O14727 1248 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 BRD1O95696 1058 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 ITGBL1O95965 494 aaPredicted RBP6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 S1PR4O95977 384 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 GGCXP38435 758 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 SIK1P57059 783 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 RIPK4P57078 832 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 ZNF827Q17R98 1081 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 USP17L2Q6R6M4 530 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 USP17L1Q7RTZ2 530 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 RNF135Q8IUD6 432 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 ZNF511Q8NB15 262 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 MIS18AQ9NYP9 233 aa6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 CDV3Q9UKY7 258 aaKnown RBP6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 FCF1Q9Y324 198 aaKnown RBP6.87□□□□□ -1.31
TRBV29-1-201ENST00000422143 HTATSF1O43719 755 aaKnown RBP6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 PTCD1O75127 700 aaKnown RBP6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 R3HDM1Q15032 1099 aaKnown RBP6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 SLC27A3Q5K4L6 730 aa6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 RNF20Q5VTR2 975 aa6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 LINC00116Q8NCU8 138 aa6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 NKX2-3Q8TAU0 364 aa6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 BAP1Q92560 729 aa6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 SMARCC1Q92922 1105 aaPredicted RBP6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 CCNL1Q9UK58 526 aaPredicted RBP6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 TNS1Q9HBL0 1735 aaKnown RBP6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 TOGARAM1Q9Y4F4 1720 aa6.86□□□□□ -1.31
TRBV29-1-201ENST00000422143 FAM196BA6NMK8 535 aa6.85□□□□□ -1.31
TRBV29-1-201ENST00000422143 ATP5J2-PTCD1G3V325 749 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms