RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 PRPF40AO75400 957 aaKnown RBP11.75□□□□□ -0.53
KDM3A-202ENST00000409064 ZBTB7AO95365 584 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
KDM3A-202ENST00000409064 TBC1D9Q6ZT07 1266 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 TEX11Q8IYF3 940 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
KDM3A-202ENST00000409064 PICK1Q9NRD5 415 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 USP19O94966 1318 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 HMGB1P09429 215 aaKnown RBP11.75□□□□□ -0.53
KDM3A-202ENST00000409064 TFCP2Q12800 502 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 MAGEB6Q8N7X4 407 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 ZBTB40Q9NUA8 1239 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 SSFA2P28290 1259 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 SBNO2Q9Y2G9 1366 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 LIG1P18858 919 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 ESR2Q92731 530 aa11.75□□□□□ -0.53
KDM3A-202ENST00000409064 MAGEC2Q9UBF1 373 aaPredicted RBP11.75□□□□□ -0.53
KDM3A-202ENST00000409064 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
KDM3A-202ENST00000409064 TTC6Q86TZ1 520 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 ERBB3P21860 1342 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 PRR36Q9H6K5 1346 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 EYA2O00167 538 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 MBD3O95983 291 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 RAB3GAP1Q15042 981 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 SYCP1Q15431 976 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 IL17REQ8NFR9 667 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 KLHDC4Q8TBB5 520 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 GJD4Q96KN9 370 aaPredicted RBP11.74□□□□□ -0.53
KDM3A-202ENST00000409064 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 HECW2Q9P2P5 1572 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 HOXB7P09629 217 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 KRT85P78386 507 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 STIM1Q13586 685 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 NCOA7Q8NI08 942 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 NAT10Q9H0A0 1025 aaKnown RBP11.74□□□□□ -0.53
KDM3A-202ENST00000409064 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.74□□□□□ -0.536e-7■■■■■ 47.8
KDM3A-202ENST00000409064 ZBTB1Q9Y2K1 713 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 TCIRG1Q13488 830 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
KDM3A-202ENST00000409064 TANGO6Q9C0B7 1094 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
KDM3A-202ENST00000409064 RBM25P49756 843 aaKnown RBP11.73□□□□□ -0.53
KDM3A-202ENST00000409064 TTLL7Q6ZT98 887 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 CCDC39Q9UFE4 941 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 CDC42BPBQ9Y5S2 1711 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 CHL1O00533 1208 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
KDM3A-202ENST00000409064 GTF2IP78347 998 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 C8orf76Q96K31 380 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 JCADQ9P266 1359 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
KDM3A-202ENST00000409064 ARID3AQ99856 593 aa11.73□□□□□ -0.53
KDM3A-202ENST00000409064 TCP10Q12799 353 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 WTAPQ15007 396 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 CKAP2LQ8IYA6 745 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 PDILTQ8N807 584 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 RAB34Q9BZG1 259 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.72□□□□□ -0.531e-7■■□□□ 13.7
KDM3A-202ENST00000409064 ADGRL3Q9HAR2 1447 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 SERPINB2P05120 415 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
KDM3A-202ENST00000409064 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
KDM3A-202ENST00000409064 PUM3Q15397 648 aaKnown RBP11.72□□□□□ -0.53
KDM3A-202ENST00000409064 A0A1B0GUL7 405 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 GIGYF1O75420 1035 aaPredicted RBP11.72□□□□□ -0.53
KDM3A-202ENST00000409064 ZYXQ15942 572 aaKnown RBP11.72□□□□□ -0.53
KDM3A-202ENST00000409064 MADDQ8WXG6 1647 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 MMP10P09238 476 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 SSRP1Q08945 709 aaKnown RBP11.72□□□□□ -0.53
KDM3A-202ENST00000409064 TRAF1Q13077 416 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 UBA5Q9GZZ9 404 aa11.72□□□□□ -0.53
KDM3A-202ENST00000409064 SAP30BPQ9UHR5 308 aaKnown RBP11.72□□□□□ -0.53
KDM3A-202ENST00000409064 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.53
KDM3A-202ENST00000409064 DOK7Q18PE1 504 aa11.71□□□□□ -0.53
KDM3A-202ENST00000409064 KLHL40Q2TBA0 621 aa11.71□□□□□ -0.53
KDM3A-202ENST00000409064 IFIT1BQ5T764 474 aaKnown RBP11.71□□□□□ -0.53
KDM3A-202ENST00000409064 WDR66Q8TBY9 1149 aa11.71□□□□□ -0.53
KDM3A-202ENST00000409064 BAG4O95429 457 aaKnown RBP11.71□□□□□ -0.53
KDM3A-202ENST00000409064 SULF1Q8IWU6 871 aa11.71□□□□□ -0.54
KDM3A-202ENST00000409064 MAP7D2Q96T17 732 aa11.71□□□□□ -0.54
KDM3A-202ENST00000409064 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.54
KDM3A-202ENST00000409064 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.54
KDM3A-202ENST00000409064 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.54
KDM3A-202ENST00000409064 TMEM266Q2M3C6 531 aa11.71□□□□□ -0.54
KDM3A-202ENST00000409064 KIAA0825Q8IV33 1275 aa11.71□□□□□ -0.54
KDM3A-202ENST00000409064 MYOM2P54296 1465 aa11.71□□□□□ -0.54
KDM3A-202ENST00000409064 GCKRQ14397 625 aa11.7□□□□□ -0.54
KDM3A-202ENST00000409064 MAST3O60307 1309 aa11.7□□□□□ -0.54
KDM3A-202ENST00000409064 B4DLN1 442 aa11.7□□□□□ -0.54
KDM3A-202ENST00000409064 MCM5P33992 734 aa11.7□□□□□ -0.54
KDM3A-202ENST00000409064 MRPL12P52815 198 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms