RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 DDX46Q7L014 1031 aaKnown RBP26.74■■□□□ 1.87
HMGA2-203ENST00000393578 VGLL2Q8N8G2 317 aa26.74■■□□□ 1.87
HMGA2-203ENST00000393578 GNPATO15228 680 aa26.73■■□□□ 1.87
HMGA2-203ENST00000393578 MAP4K1Q92918 833 aa26.73■■□□□ 1.87
HMGA2-203ENST00000393578 ABCC12Q96J65 1359 aa26.73■■□□□ 1.87
HMGA2-203ENST00000393578 GOLIM4O00461 696 aa26.73■■□□□ 1.87
HMGA2-203ENST00000393578 KCNB2Q92953 911 aa26.73■■□□□ 1.87
HMGA2-203ENST00000393578 ADORA1P30542 326 aa26.72■■□□□ 1.87
HMGA2-203ENST00000393578 TTC39AQ5SRH9 613 aa26.72■■□□□ 1.87
HMGA2-203ENST00000393578 RTCBQ9Y3I0 505 aaKnown RBP26.72■■□□□ 1.87
HMGA2-203ENST00000393578 MROH5Q6ZUA9 1318 aa26.72■■□□□ 1.87
HMGA2-203ENST00000393578 TAF1LQ8IZX4 1826 aa26.72■■□□□ 1.87
HMGA2-203ENST00000393578 FRAT2O75474 233 aaPredicted RBP26.71■■□□□ 1.87
HMGA2-203ENST00000393578 PDE8BO95263 885 aa26.71■■□□□ 1.87
HMGA2-203ENST00000393578 NECTIN1Q15223 517 aa26.71■■□□□ 1.87
HMGA2-203ENST00000393578 RASEFQ8IZ41 740 aa26.71■■□□□ 1.87
HMGA2-203ENST00000393578 BCL2L12Q9HB09 334 aa26.71■■□□□ 1.87
HMGA2-203ENST00000393578 BRWD3Q6RI45 1802 aa26.7■■□□□ 1.86
HMGA2-203ENST00000393578 ZPR1O75312 459 aa26.69■■□□□ 1.86
HMGA2-203ENST00000393578 UPF3BQ9BZI7 483 aaKnown RBP26.69■■□□□ 1.86
HMGA2-203ENST00000393578 RBM8AQ9Y5S9 174 aaKnown RBP26.69■■□□□ 1.86
HMGA2-203ENST00000393578 USPL1Q5W0Q7 1092 aa26.69■■□□□ 1.86
HMGA2-203ENST00000393578 ZNF589Q86UQ0 364 aaPredicted RBP26.69■■□□□ 1.86
HMGA2-203ENST00000393578 FOXD4L1Q9NU39 408 aa26.69■■□□□ 1.86
HMGA2-203ENST00000393578 MCMDC2Q4G0Z9 681 aa26.68■■□□□ 1.86
HMGA2-203ENST00000393578 PRPF40BQ6NWY9 871 aaKnown RBP26.68■■□□□ 1.86
HMGA2-203ENST00000393578 FAM196AQ6ZSG2 479 aa26.68■■□□□ 1.86
HMGA2-203ENST00000393578 MPHOSPH8Q99549 860 aa26.68■■□□□ 1.86
HMGA2-203ENST00000393578 KCNJ4P48050 445 aa26.67■■□□□ 1.86
HMGA2-203ENST00000393578 TBC1D9BQ66K14 1250 aa26.67■■□□□ 1.86
HMGA2-203ENST00000393578 SMIM5Q71RC9 77 aa26.67■■□□□ 1.86
HMGA2-203ENST00000393578 ZNF512BQ96KM6 892 aaPredicted RBP26.67■■□□□ 1.86
HMGA2-203ENST00000393578 SEC31BQ9NQW1 1179 aa26.67■■□□□ 1.86
HMGA2-203ENST00000393578 TAF5LO75529 589 aa26.67■■□□□ 1.86
HMGA2-203ENST00000393578 C4BP0C0L5 1744 aa26.67■■□□□ 1.86
HMGA2-203ENST00000393578 ZKSCAN1P17029 563 aaPredicted RBP26.67■■□□□ 1.86
HMGA2-203ENST00000393578 PUM3Q15397 648 aaKnown RBP26.67■■□□□ 1.86
HMGA2-203ENST00000393578 ERFEQ4G0M1 354 aa26.67■■□□□ 1.86
HMGA2-203ENST00000393578 TM6SF1Q9BZW5 370 aa26.66■■□□□ 1.86
HMGA2-203ENST00000393578 HELLSQ9NRZ9 838 aa26.66■■□□□ 1.86
HMGA2-203ENST00000393578 FKBP4Q02790 459 aaKnown RBP eCLIP26.66■■□□□ 1.863e-6■■□□□ 13
HMGA2-203ENST00000393578 CREB3L3Q68CJ9 461 aa26.66■■□□□ 1.86
HMGA2-203ENST00000393578 KRT27Q7Z3Y8 459 aa26.66■■□□□ 1.86
HMGA2-203ENST00000393578 LPIN2Q92539 896 aa26.66■■□□□ 1.86
HMGA2-203ENST00000393578 ARHGEF1Q92888 912 aaKnown RBP26.66■■□□□ 1.86
HMGA2-203ENST00000393578 TMX3Q96JJ7 454 aa26.66■■□□□ 1.86
HMGA2-203ENST00000393578 SETDB2Q96T68 719 aa26.66■■□□□ 1.86
HMGA2-203ENST00000393578 NYXQ9GZU5 481 aa26.66■■□□□ 1.86
HMGA2-203ENST00000393578 SRP68Q9UHB9 627 aaKnown RBP26.66■■□□□ 1.86
HMGA2-203ENST00000393578 IGHMBP2P38935 993 aaKnown RBP26.65■■□□□ 1.86
HMGA2-203ENST00000393578 LRRFIP1Q32MZ4 808 aaKnown RBP26.65■■□□□ 1.86
HMGA2-203ENST00000393578 SLC10A5Q5PT55 438 aa26.65■■□□□ 1.86
HMGA2-203ENST00000393578 RNF20Q5VTR2 975 aa26.65■■□□□ 1.86
HMGA2-203ENST00000393578 CWC22Q9HCG8 908 aaKnown RBP26.65■■□□□ 1.86
HMGA2-203ENST00000393578 FGFR2P21802 821 aa26.64■■□□□ 1.86
HMGA2-203ENST00000393578 SF3B3Q15393 1217 aaKnown RBP26.64■■□□□ 1.86
HMGA2-203ENST00000393578 BICDL1Q6ZP65 573 aa26.64■■□□□ 1.86
HMGA2-203ENST00000393578 RNF113AO15541 343 aaKnown RBP26.63■■□□□ 1.85
HMGA2-203ENST00000393578 SSFA2P28290 1259 aa26.63■■□□□ 1.85
HMGA2-203ENST00000393578 ZMYM1Q5SVZ6 1142 aa26.63■■□□□ 1.85
HMGA2-203ENST00000393578 TTC14Q96N46 770 aa26.63■■□□□ 1.85
HMGA2-203ENST00000393578 CDC5LQ99459 802 aaKnown RBP26.63■■□□□ 1.85
HMGA2-203ENST00000393578 COL24A1Q17RW2 1714 aa26.63■■□□□ 1.85
HMGA2-203ENST00000393578 SLC27A2O14975 620 aa26.62■■□□□ 1.85
HMGA2-203ENST00000393578 CHGBP05060 677 aa26.62■■□□□ 1.85
HMGA2-203ENST00000393578 GTF2E1P29083 439 aaPredicted RBP26.62■■□□□ 1.85
HMGA2-203ENST00000393578 SCARF1Q14162 830 aa26.62■■□□□ 1.85
HMGA2-203ENST00000393578 RAB3GAP1Q15042 981 aa26.62■■□□□ 1.85
HMGA2-203ENST00000393578 AMIGO3Q86WK7 504 aa26.62■■□□□ 1.85
HMGA2-203ENST00000393578 SEC62Q99442 399 aaKnown RBP26.62■■□□□ 1.85
HMGA2-203ENST00000393578 HMG20BQ9P0W2 317 aa26.62■■□□□ 1.85
HMGA2-203ENST00000393578 CASTP20810 708 aaKnown RBP26.62■■□□□ 1.85
HMGA2-203ENST00000393578 TRAPPC3LQ5T215 181 aa26.62■■□□□ 1.85
HMGA2-203ENST00000393578 LRRC4BQ9NT99 713 aa26.62■■□□□ 1.85
HMGA2-203ENST00000393578 CUL4AQ13619 759 aa26.61■■□□□ 1.85
HMGA2-203ENST00000393578 HELBQ8NG08 1087 aaPredicted RBP26.61■■□□□ 1.85
HMGA2-203ENST00000393578 JAKMIP1Q96N16 626 aaKnown RBP26.61■■□□□ 1.85
HMGA2-203ENST00000393578 ZSWIM6Q9HCJ5 1215 aa26.61■■□□□ 1.85
HMGA2-203ENST00000393578 ARAP2Q8WZ64 1704 aa26.61■■□□□ 1.85
HMGA2-203ENST00000393578 ZFYP08048 801 aaPredicted RBP26.6■■□□□ 1.85
HMGA2-203ENST00000393578 SLC5A1P13866 664 aa26.6■■□□□ 1.85
HMGA2-203ENST00000393578 RFC4P35249 363 aa26.6■■□□□ 1.85
HMGA2-203ENST00000393578 MCAMP43121 646 aa26.6■■□□□ 1.85
HMGA2-203ENST00000393578 ZAP70P43403 619 aa26.6■■□□□ 1.85
HMGA2-203ENST00000393578 ADCK5Q3MIX3 580 aa26.6■■□□□ 1.85
HMGA2-203ENST00000393578 TSGA10IPQ3SY00 556 aa26.6■■□□□ 1.85
HMGA2-203ENST00000393578 NBPF5PQ86XG9 351 aaPredicted RBP26.6■■□□□ 1.85
HMGA2-203ENST00000393578 U3KPZ7 1027 aaPredicted RBP26.6■■□□□ 1.85
HMGA2-203ENST00000393578 UQCRFS1P1P0C7P4 283 aa26.59■■□□□ 1.85
HMGA2-203ENST00000393578 ADRA2BP18089 450 aa26.59■■□□□ 1.85
HMGA2-203ENST00000393578 ARID4AP29374 1257 aaPredicted RBP26.59■■□□□ 1.85
HMGA2-203ENST00000393578 SLC27A3Q5K4L6 730 aa26.59■■□□□ 1.85
HMGA2-203ENST00000393578 CCDC102BQ68D86 513 aa26.59■■□□□ 1.85
HMGA2-203ENST00000393578 CCDC129Q6ZRS4 1044 aa26.59■■□□□ 1.85
HMGA2-203ENST00000393578 CYP46A1Q9Y6A2 500 aa26.59■■□□□ 1.85
HMGA2-203ENST00000393578 C4AP0C0L4 1744 aa26.59■■□□□ 1.85
HMGA2-203ENST00000393578 PSMA5P28066 241 aa26.58■■□□□ 1.85
HMGA2-203ENST00000393578 TPTE2Q6XPS3 522 aa26.58■■□□□ 1.85
HMGA2-203ENST00000393578 INTS4Q96HW7 963 aaKnown RBP26.58■■□□□ 1.85
HMGA2-203ENST00000393578 RPAP1Q9BWH6 1393 aaPredicted RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms