RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 VPS18Q9P253 973 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
ITSN1-201ENST00000379960 GCP02774 474 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
ITSN1-201ENST00000379960 XIRP1Q702N8 1843 aaKnown RBP12.61□□□□□ -0.39
ITSN1-201ENST00000379960 C11orf91Q3C1V1 193 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 CC2D1AQ6P1N0 951 aaPredicted RBP12.61□□□□□ -0.39
ITSN1-201ENST00000379960 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 KAT2BQ92831 832 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 INHBEP58166 350 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 SKIDA1Q1XH10 827 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 CCDC93Q567U6 631 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 GIMAP7Q8NHV1 300 aa12.61□□□□□ -0.39
ITSN1-201ENST00000379960 CCDC69A6NI79 296 aa12.6□□□□□ -0.39
ITSN1-201ENST00000379960 CASC1Q6TDU7 716 aa12.6□□□□□ -0.39
ITSN1-201ENST00000379960 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
ITSN1-201ENST00000379960 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
ITSN1-201ENST00000379960 KLHL33A6NCF5 533 aa12.6□□□□□ -0.39
ITSN1-201ENST00000379960 KIF3CO14782 793 aa12.6□□□□□ -0.39
ITSN1-201ENST00000379960 PRPF38AQ8NAV1 312 aaKnown RBP12.6□□□□□ -0.39
ITSN1-201ENST00000379960 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
ITSN1-201ENST00000379960 TBC1D22AQ8WUA7 517 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 FAXDC2Q96IV6 333 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 MIS18AQ9NYP9 233 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 HNRNPH1P31943 449 aaKnown RBP12.59□□□□□ -0.39
ITSN1-201ENST00000379960 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
ITSN1-201ENST00000379960 CLSTN1O94985 981 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 PAX7P23759 505 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 MCM2P49736 904 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 CCZ1BP86790 482 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 CCZ1P86791 482 aaPredicted RBP12.59□□□□□ -0.39
ITSN1-201ENST00000379960 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 GBP6Q6ZN66 633 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 MIEF2Q96C03 454 aa12.59□□□□□ -0.39
ITSN1-201ENST00000379960 JPH2Q9BR39 696 aaPredicted RBP12.59□□□□□ -0.39
ITSN1-201ENST00000379960 SDSP20132 328 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 LIG3P49916 1009 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
ITSN1-201ENST00000379960 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 CPLX2Q6PUV4 134 aaKnown RBP12.58□□□□□ -0.4
ITSN1-201ENST00000379960 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 RGPD2P0DJD1 1756 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 A0A087WUV0 522 aaPredicted RBP12.58□□□□□ -0.4
ITSN1-201ENST00000379960 ERLIN2O94905 339 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 NBPF6Q5VWK0 638 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 FBXW10Q5XX13 1052 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 NBPF5PQ86XG9 351 aaPredicted RBP12.58□□□□□ -0.4
ITSN1-201ENST00000379960 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 NBPF4Q96M43 638 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 ARFGAP3Q9NP61 516 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 AXIN2Q9Y2T1 843 aa12.58□□□□□ -0.4
ITSN1-201ENST00000379960 NEMFO60524 1076 aa12.57□□□□□ -0.4
ITSN1-201ENST00000379960 ZSCAN22P10073 491 aaPredicted RBP12.57□□□□□ -0.4
ITSN1-201ENST00000379960 KRT24Q2M2I5 525 aa12.57□□□□□ -0.4
ITSN1-201ENST00000379960 KCNV1Q6PIU1 500 aa12.57□□□□□ -0.4
ITSN1-201ENST00000379960 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
ITSN1-201ENST00000379960 UPF3BQ9BZI7 483 aaKnown RBP12.57□□□□□ -0.4
ITSN1-201ENST00000379960 NUP62CLQ9H1M0 184 aa12.57□□□□□ -0.4
ITSN1-201ENST00000379960 MKRN1Q9UHC7 482 aaKnown RBP12.57□□□□□ -0.4
ITSN1-201ENST00000379960 GNL2Q13823 731 aaKnown RBP12.57□□□□□ -0.4
ITSN1-201ENST00000379960 FUT8Q9BYC5 575 aa12.57□□□□□ -0.4
ITSN1-201ENST00000379960 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
ITSN1-201ENST00000379960 RPS6KA5O75582 802 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 EVCP57679 992 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 ZKSCAN8Q15776 578 aaPredicted RBP12.56□□□□□ -0.4
ITSN1-201ENST00000379960 CCDC158Q5M9N0 1113 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 LRRC31Q6UY01 552 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 KCNH5Q8NCM2 988 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 CARD6Q9BX69 1037 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 TTC36A6NLP5 189 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
ITSN1-201ENST00000379960 TADA3O75528 432 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 LIG1P18858 919 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
ITSN1-201ENST00000379960 DNM1Q05193 864 aaKnown RBP12.56□□□□□ -0.4
ITSN1-201ENST00000379960 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
ITSN1-201ENST00000379960 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 GNL3LQ9NVN8 582 aaKnown RBP12.56□□□□□ -0.4
ITSN1-201ENST00000379960 ERC2O15083 957 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 ZNF165P49910 485 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 RBM5P52756 815 aaKnown RBP eCLIP12.56□□□□□ -0.4
ITSN1-201ENST00000379960 IP6K1Q92551 441 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 DNAJC25Q9H1X3 360 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
ITSN1-201ENST00000379960 NPHP3Q7Z494 1330 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 IGSF1Q8N6C5 1336 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 DTNBO60941 627 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 USP8P40818 1118 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 HOMER1Q86YM7 354 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 ZNF513Q8N8E2 541 aaPredicted RBP12.55□□□□□ -0.4
ITSN1-201ENST00000379960 PPP1R13BQ96KQ4 1090 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 PDE11AQ9HCR9 933 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 DNAI1Q9UI46 699 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 PALD1Q9ULE6 856 aa12.55□□□□□ -0.4
ITSN1-201ENST00000379960 TRPM3Q9HCF6 1732 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms