RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CEP152O94986 1710 aa14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 CCDC175P0C221 793 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 RFC4P35249 363 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 RBM5P52756 815 aaKnown RBP eCLIP14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 CEP135Q66GS9 1140 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 CTR9Q6PD62 1173 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 ACSBG1Q96GR2 724 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 STX6O43752 255 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 ZNF165P49910 485 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 CCDC152Q4G0S7 254 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 ZNF287Q9HBT7 754 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 AATKQ6ZMQ8 1374 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 CPLX3Q8WVH0 158 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 NAPBQ9H115 298 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 GDPD2Q9HCC8 539 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 GSTTP1A0A1W2PQM5 241 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 CLCN1P35523 988 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 LMAN1P49257 510 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 UBE2HP62256 183 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 GUCY1B3Q02153 619 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 CCDC150Q8NCX0 1101 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 GOPCQ9HD26 462 aa14.13□□□□□ -0.15
NPLOC4-202ENST00000374747 DDX46Q7L014 1031 aaKnown RBP14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 TBC1D32Q96NH3 1257 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 ALS2CR12Q96Q35 445 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 DCTPP1Q9H773 170 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 SPECC1Q5M775 1068 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 TICAM2Q86XR7 235 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 BCCIPQ9P287 314 aaKnown RBP eCLIP14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 CEP85Q6P2H3 762 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 ZNF790Q6PG37 636 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 GJB2P29033 226 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 PDE1AP54750 535 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 ZSCAN23Q3MJ62 389 aa14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 JARID2Q92833 1246 aaPredicted RBP14.12□□□□□ -0.15
NPLOC4-202ENST00000374747 CCDC171Q6TFL3 1326 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 UQCRFS1P1P0C7P4 283 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 IL15P40933 162 aaPredicted RBP14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 USP5P45974 858 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 TDRD12Q587J7 1177 aaKnown RBP14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 NBPF6Q5VWK0 638 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 LMBR1LQ6UX01 489 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 KRT222Q8N1A0 295 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 NBPF4Q96M43 638 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 GOLIM4O00461 696 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 TIGD1Q96MW7 591 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 TMX1Q9H3N1 280 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 DZIP1Q86YF9 867 aaKnown RBP14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 SEC63Q9UGP8 760 aaKnown RBP14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 ROBO2Q9HCK4 1378 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 LRSAM1Q6UWE0 723 aa14.11□□□□□ -0.15
NPLOC4-202ENST00000374747 HLTFQ14527 1009 aaKnown RBP eCLIP14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 UBE2Q2Q8WVN8 375 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 ANTXR1Q9H6X2 564 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 RBM27Q9P2N5 1060 aaKnown RBP14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 INO80Q9ULG1 1556 aaPredicted RBP14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 DNA2P51530 1060 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 NBPF5PQ86XG9 351 aaPredicted RBP14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 PPRC1Q5VV67 1664 aaKnown RBP14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 MATR3P43243 847 aaKnown RBP eCLIP14.1□□□□□ -0.152e-8■■■■■ 31.3
NPLOC4-202ENST00000374747 SMC5Q8IY18 1101 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 NEBLO76041 1014 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 KIF20AO95235 890 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 RAB34Q9BZG1 259 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 ZNF213O14771 459 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 SDSP20132 328 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 GIGYF2Q6Y7W6 1299 aaKnown RBP14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 SLF2Q8IX21 1173 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 ZMYND15Q9H091 742 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 TAOK3Q9H2K8 898 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 TMOD2Q9NZR1 351 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 ADGRB1O14514 1584 aa14.1□□□□□ -0.15
NPLOC4-202ENST00000374747 DZIP3Q86Y13 1208 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 CTCFLQ8NI51 663 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 RNF41Q9H4P4 317 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 TFIP11Q9UBB9 837 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 MROH2AA6NES4 1674 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 ZSCAN29Q8IWY8 852 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 PLEKHF1Q96S99 279 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 GOLGA8BA8MQT2 603 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 BIN1O00499 593 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 SPECC1LQ69YQ0 1117 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 GPATCH11Q8N954 259 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 SETDB2Q96T68 719 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 SLC52A2Q9HAB3 445 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 SLC12A7Q9Y666 1083 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 KIDINS220Q9ULH0 1771 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 GNG11P61952 73 aa14.09□□□□□ -0.15
NPLOC4-202ENST00000374747 TMEM94Q12767 1356 aa14.08□□□□□ -0.15
NPLOC4-202ENST00000374747 ZBTB7BO15156 539 aaPredicted RBP14.08□□□□□ -0.15
NPLOC4-202ENST00000374747 IPO4Q8TEX9 1081 aaKnown RBP14.08□□□□□ -0.15
NPLOC4-202ENST00000374747 CCDC12Q8WUD4 166 aaPredicted RBP14.08□□□□□ -0.15
NPLOC4-202ENST00000374747 HMG20BQ9P0W2 317 aa14.08□□□□□ -0.15
NPLOC4-202ENST00000374747 KIAA0232Q92628 1395 aa14.08□□□□□ -0.16
NPLOC4-202ENST00000374747 HCLS1P14317 486 aaPredicted RBP14.08□□□□□ -0.16
NPLOC4-202ENST00000374747 SSRP1Q08945 709 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-202ENST00000374747 TSHZ3Q63HK5 1081 aa14.08□□□□□ -0.16
NPLOC4-202ENST00000374747 MINDY4BA8MYZ0 360 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms