RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 TSPY8P0CW00 308 aa17.08■□□□□ 0.32
RLF-201ENST00000372771 MIGA1Q8NAN2 632 aa17.08■□□□□ 0.32
RLF-201ENST00000372771 ZNF622Q969S3 477 aaKnown RBP eCLIP17.08■□□□□ 0.321e-8■□□□□ 10.8
RLF-201ENST00000372771 MMRN2Q9H8L6 949 aa17.08■□□□□ 0.32
RLF-201ENST00000372771 RRAGBQ5VZM2 374 aa17.07■□□□□ 0.32
RLF-201ENST00000372771 KRT23Q9C075 422 aa17.07■□□□□ 0.32
RLF-201ENST00000372771 DTNBO60941 627 aa17.07■□□□□ 0.32
RLF-201ENST00000372771 BCCIPQ9P287 314 aaKnown RBP eCLIP17.07■□□□□ 0.32
RLF-201ENST00000372771 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
RLF-201ENST00000372771 HEATR3Q7Z4Q2 680 aa17.07■□□□□ 0.32
RLF-201ENST00000372771 MRPS27Q92552 414 aaKnown RBP17.07■□□□□ 0.32
RLF-201ENST00000372771 ZFYP08048 801 aaPredicted RBP17.07■□□□□ 0.32
RLF-201ENST00000372771 GNG11P61952 73 aa17.07■□□□□ 0.32
RLF-201ENST00000372771 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
RLF-201ENST00000372771 SCLT1Q96NL6 688 aa17.07■□□□□ 0.32
RLF-201ENST00000372771 TTC12Q9H892 705 aaPredicted RBP17.07■□□□□ 0.32
RLF-201ENST00000372771 MAP3K19Q56UN5 1328 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
RLF-201ENST00000372771 TRIM47Q96LD4 638 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 N4BP3O15049 544 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 DNMT1P26358 1616 aaKnown RBP17.06■□□□□ 0.32
RLF-201ENST00000372771 WDR78Q5VTH9 848 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 MACROD2A1Z1Q3 448 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 USP8P40818 1118 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 VPS36Q86VN1 386 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 JAG2Q9Y219 1238 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 TTC41PQ6P2S7 1318 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 LDHCP07864 332 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 AMPD3Q01432 767 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 SIRT1Q96EB6 747 aa17.06■□□□□ 0.32
RLF-201ENST00000372771 ZFYVE9O95405 1425 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 PICALMQ13492 652 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 CTNNBL1Q8WYA6 563 aaPredicted RBP17.05■□□□□ 0.32
RLF-201ENST00000372771 CCDC129Q6ZRS4 1044 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
RLF-201ENST00000372771 YTHDC2Q9H6S0 1430 aaKnown RBP17.05■□□□□ 0.32
RLF-201ENST00000372771 SOS1Q07889 1333 aaPredicted RBP17.05■□□□□ 0.32
RLF-201ENST00000372771 MAGEB6Q8N7X4 407 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 KCNG4Q8TDN1 519 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 TRERF1Q96PN7 1200 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 TMCO5BA8MYB1 307 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 GBP2P32456 591 aaPredicted RBP17.05■□□□□ 0.32
RLF-201ENST00000372771 KANK3Q6NY19 840 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 RUFY3Q7L099 469 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 CCDC150Q8NCX0 1101 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 RNF113AO15541 343 aaKnown RBP17.05■□□□□ 0.32
RLF-201ENST00000372771 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
RLF-201ENST00000372771 FAM200AQ8TCP9 573 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 ESR2Q92731 530 aa17.05■□□□□ 0.32
RLF-201ENST00000372771 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 MAP9Q49MG5 647 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
RLF-201ENST00000372771 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 MYO1BO43795 1136 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 PAFAH1B1P43034 410 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 DZIP3Q86Y13 1208 aaKnown RBP17.04■□□□□ 0.32
RLF-201ENST00000372771 ZBTB9Q96C00 473 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 FEZ1Q99689 392 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 EXOC1Q9NV70 894 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 SKILP12757 684 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 NOLC1Q14978 699 aaKnown RBP eCLIP17.04■□□□□ 0.32
RLF-201ENST00000372771 STAT6P42226 847 aa17.04■□□□□ 0.32
RLF-201ENST00000372771 DHX58Q96C10 678 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 JADE2Q9NQC1 790 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 SETDB2Q96T68 719 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 SAMM50Q9Y512 469 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 GCP02774 474 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 PRPF4BQ13523 1007 aaKnown RBP17.03■□□□□ 0.32
RLF-201ENST00000372771 DYDC1Q8WWB3 177 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 NPHP3Q7Z494 1330 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 PTPDC1A2A3K4 754 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 NOP2P46087 812 aaKnown RBP17.03■□□□□ 0.32
RLF-201ENST00000372771 TYRO3Q06418 890 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 ZKSCAN3Q9BRR0 538 aa17.03■□□□□ 0.32
RLF-201ENST00000372771 ZMYM4Q5VZL5 1548 aa17.02■□□□□ 0.32
RLF-201ENST00000372771 IFFO1Q0D2I5 559 aa17.02■□□□□ 0.32
RLF-201ENST00000372771 KRI1Q8N9T8 703 aaKnown RBP17.02■□□□□ 0.32
RLF-201ENST00000372771 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
RLF-201ENST00000372771 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.32
RLF-201ENST00000372771 MAGEB6P1A0A0J9YX57 407 aa17.02■□□□□ 0.32
RLF-201ENST00000372771 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
RLF-201ENST00000372771 IRS4O14654 1257 aaPredicted RBP17.02■□□□□ 0.32
RLF-201ENST00000372771 HLA-DOAP06340 250 aa17.02■□□□□ 0.32
RLF-201ENST00000372771 KCNA6P17658 529 aa17.02■□□□□ 0.31
RLF-201ENST00000372771 LMOD1P29536 600 aaPredicted RBP17.02■□□□□ 0.31
RLF-201ENST00000372771 IL13P35225 146 aa17.02■□□□□ 0.31
RLF-201ENST00000372771 HLTFQ14527 1009 aaKnown RBP eCLIP17.02■□□□□ 0.311e-6■■■□□ 15.6
RLF-201ENST00000372771 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.31
RLF-201ENST00000372771 ALS2CR12Q96Q35 445 aa17.02■□□□□ 0.31
RLF-201ENST00000372771 SPTLC2O15270 562 aa17.01■□□□□ 0.31
RLF-201ENST00000372771 ST5P78524 1137 aa17.01■□□□□ 0.31
RLF-201ENST00000372771 PPP4R3AQ6IN85 833 aa17.01■□□□□ 0.31
RLF-201ENST00000372771 IL2RBP14784 551 aa17.01■□□□□ 0.31
RLF-201ENST00000372771 GOLGA6L7A0A1B0GV03 622 aa17.01■□□□□ 0.31
RLF-201ENST00000372771 TRIM21P19474 475 aaKnown RBP17.01■□□□□ 0.31
RLF-201ENST00000372771 SYCP3Q8IZU3 236 aa17.01■□□□□ 0.31
RLF-201ENST00000372771 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms