RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 LOC102724428A0A0B4J2F2 783 aa7.5□□□□□ -1.21
XCL1-201ENST00000367818 WDR64B1ANS9 1081 aa7.5□□□□□ -1.21
XCL1-201ENST00000367818 J3QW42 95 aa7.5□□□□□ -1.21
XCL1-201ENST00000367818 SIK1P57059 783 aa7.5□□□□□ -1.21
XCL1-201ENST00000367818 CACTIN-AS1Q8N1I8 211 aa7.5□□□□□ -1.21
XCL1-201ENST00000367818 GAS2L2Q8NHY3 880 aa7.5□□□□□ -1.21
XCL1-201ENST00000367818 FBXL18Q96ME1 805 aa7.5□□□□□ -1.21
XCL1-201ENST00000367818 TRIM33Q9UPN9 1127 aa7.5□□□□□ -1.21
XCL1-201ENST00000367818 CD68P34810 354 aaPredicted RBP7.49□□□□□ -1.21
XCL1-201ENST00000367818 MSMPQ1L6U9 139 aa7.49□□□□□ -1.21
XCL1-201ENST00000367818 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.49□□□□□ -1.21
XCL1-201ENST00000367818 BEND4Q6ZU67 534 aa7.49□□□□□ -1.21
XCL1-201ENST00000367818 VSIG10LQ86VR7 867 aa7.49□□□□□ -1.21
XCL1-201ENST00000367818 CCDC39Q9UFE4 941 aa7.49□□□□□ -1.21
XCL1-201ENST00000367818 PPME1Q9Y570 386 aa7.49□□□□□ -1.21
XCL1-201ENST00000367818 PRNPP04156 253 aa7.48□□□□□ -1.21
XCL1-201ENST00000367818 NEUROD2Q15784 382 aa7.48□□□□□ -1.21
XCL1-201ENST00000367818 CHMP7Q8WUX9 453 aaPredicted RBP7.48□□□□□ -1.21
XCL1-201ENST00000367818 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
XCL1-201ENST00000367818 NSUN5Q96P11 429 aaKnown RBP7.48□□□□□ -1.21
XCL1-201ENST00000367818 KCNF1Q9H3M0 494 aa7.48□□□□□ -1.21
XCL1-201ENST00000367818 DBX1A6NMT0 343 aa7.47□□□□□ -1.21
XCL1-201ENST00000367818 KRTAP9-7A8MTY7 169 aa7.47□□□□□ -1.21
XCL1-201ENST00000367818 KIAA1211Q6ZU35 1233 aa7.47□□□□□ -1.21
XCL1-201ENST00000367818 SIX5Q8N196 739 aa7.47□□□□□ -1.21
XCL1-201ENST00000367818 LARGE2Q8N3Y3 721 aa7.47□□□□□ -1.21
XCL1-201ENST00000367818 KCNK4Q9NYG8 393 aa7.47□□□□□ -1.21
XCL1-201ENST00000367818 PSAPP07602 524 aa7.46□□□□□ -1.21
XCL1-201ENST00000367818 BMP3P12645 472 aa7.46□□□□□ -1.21
XCL1-201ENST00000367818 HOXD8P13378 290 aaPredicted RBP7.46□□□□□ -1.21
XCL1-201ENST00000367818 ZNF648Q5T619 568 aaPredicted RBP7.46□□□□□ -1.21
XCL1-201ENST00000367818 NFXL1Q6ZNB6 911 aa7.46□□□□□ -1.21
XCL1-201ENST00000367818 PLEKHM2Q8IWE5 1019 aa7.46□□□□□ -1.21
XCL1-201ENST00000367818 TP53INP2Q8IXH6 220 aa7.46□□□□□ -1.21
XCL1-201ENST00000367818 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
XCL1-201ENST00000367818 LINC01387J3KSC0 135 aa7.46□□□□□ -1.22
XCL1-201ENST00000367818 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.22
XCL1-201ENST00000367818 GIMAP7Q8NHV1 300 aa7.46□□□□□ -1.22
XCL1-201ENST00000367818 ALG2Q9H553 416 aa7.46□□□□□ -1.22
XCL1-201ENST00000367818 KLK14Q9P0G3 267 aa7.46□□□□□ -1.22
XCL1-201ENST00000367818 HIF3AQ9Y2N7 669 aa7.46□□□□□ -1.22
XCL1-201ENST00000367818 LEMD3Q9Y2U8 911 aa7.46□□□□□ -1.22
XCL1-201ENST00000367818 RBM19Q9Y4C8 960 aaKnown RBP7.46□□□□□ -1.22
XCL1-201ENST00000367818 SART1O43290 800 aaKnown RBP7.45□□□□□ -1.22
XCL1-201ENST00000367818 EGFRP00533 1210 aa7.45□□□□□ -1.22
XCL1-201ENST00000367818 FOSL1P15407 271 aa7.45□□□□□ -1.22
XCL1-201ENST00000367818 SOX18P35713 384 aa7.45□□□□□ -1.22
XCL1-201ENST00000367818 DUOXA2Q1HG44 320 aa7.45□□□□□ -1.22
XCL1-201ENST00000367818 OGFOD1Q8N543 542 aa7.45□□□□□ -1.22
XCL1-201ENST00000367818 MFSD14AQ96MC6 490 aa7.45□□□□□ -1.22
XCL1-201ENST00000367818 ATG3Q9NT62 314 aa7.45□□□□□ -1.22
XCL1-201ENST00000367818 USP17L3A6NCW0 530 aa7.44□□□□□ -1.22
XCL1-201ENST00000367818 USP17L4A6NCW7 530 aa7.44□□□□□ -1.22
XCL1-201ENST00000367818 RASA1P20936 1047 aa7.44□□□□□ -1.22
XCL1-201ENST00000367818 COL19A1Q14993 1142 aa7.44□□□□□ -1.22
XCL1-201ENST00000367818 ZNF124Q15973 351 aa7.44□□□□□ -1.22
XCL1-201ENST00000367818 CPSF6Q16630 551 aaKnown RBP eCLIP7.44□□□□□ -1.22
XCL1-201ENST00000367818 TXNDC11Q6PKC3 985 aa7.44□□□□□ -1.22
XCL1-201ENST00000367818 USP17L2Q6R6M4 530 aa7.44□□□□□ -1.22
XCL1-201ENST00000367818 USP17L1Q7RTZ2 530 aa7.44□□□□□ -1.22
XCL1-201ENST00000367818 TM4SF5O14894 197 aa7.43□□□□□ -1.22
XCL1-201ENST00000367818 PREPP48147 710 aa7.43□□□□□ -1.22
XCL1-201ENST00000367818 ANKRD34AQ69YU3 496 aa7.43□□□□□ -1.22
XCL1-201ENST00000367818 ATAD2BQ9ULI0 1458 aa7.42□□□□□ -1.22
XCL1-201ENST00000367818 MMP20O60882 483 aa7.42□□□□□ -1.22
XCL1-201ENST00000367818 MICAL2O94851 1124 aa7.42□□□□□ -1.22
XCL1-201ENST00000367818 UBASH3BQ8TF42 649 aa7.42□□□□□ -1.22
XCL1-201ENST00000367818 ZNF594Q96JF6 807 aaPredicted RBP7.42□□□□□ -1.22
XCL1-201ENST00000367818 CARD10Q9BWT7 1032 aa7.42□□□□□ -1.22
XCL1-201ENST00000367818 SMARCA4P51532 1647 aa7.41□□□□□ -1.22
XCL1-201ENST00000367818 XYLBO75191 536 aa7.41□□□□□ -1.22
XCL1-201ENST00000367818 DKK1O94907 266 aa7.41□□□□□ -1.22
XCL1-201ENST00000367818 DGKZQ13574 1117 aa7.41□□□□□ -1.22
XCL1-201ENST00000367818 KLHL23Q8NBE8 558 aa7.41□□□□□ -1.22
XCL1-201ENST00000367818 AGBL5Q8NDL9 886 aa7.41□□□□□ -1.22
XCL1-201ENST00000367818 FOXD4L4Q8WXT5 416 aaPredicted RBP7.41□□□□□ -1.22
XCL1-201ENST00000367818 OSBPL1AQ9BXW6 950 aa7.41□□□□□ -1.22
XCL1-201ENST00000367818 RTCBQ9Y3I0 505 aaKnown RBP7.41□□□□□ -1.22
XCL1-201ENST00000367818 ERCC6Q03468 1493 aa7.41□□□□□ -1.22
XCL1-201ENST00000367818 PAPLNO95428 1278 aa7.4□□□□□ -1.22
XCL1-201ENST00000367818 F13BP05160 661 aa7.4□□□□□ -1.22
XCL1-201ENST00000367818 COL26A1Q96A83 441 aa7.4□□□□□ -1.22
XCL1-201ENST00000367818 NESP48681 1621 aa7.4□□□□□ -1.22
XCL1-201ENST00000367818 NCAPD3P42695 1498 aa7.4□□□□□ -1.23
XCL1-201ENST00000367818 FSCN2O14926 492 aa7.39□□□□□ -1.23
XCL1-201ENST00000367818 USP20Q9Y2K6 914 aa7.39□□□□□ -1.23
XCL1-201ENST00000367818 ADAM11O75078 769 aa7.38□□□□□ -1.23
XCL1-201ENST00000367818 CDC27P30260 824 aa7.38□□□□□ -1.23
XCL1-201ENST00000367818 PKN1Q16512 942 aa7.38□□□□□ -1.23
XCL1-201ENST00000367818 FAM117BQ6P1L5 589 aa7.38□□□□□ -1.23
XCL1-201ENST00000367818 FBXL6Q8N531 539 aa7.38□□□□□ -1.23
XCL1-201ENST00000367818 FLCNQ8NFG4 579 aa7.38□□□□□ -1.23
XCL1-201ENST00000367818 LACRTQ9GZZ8 138 aa7.38□□□□□ -1.23
XCL1-201ENST00000367818 BSDC1Q9NW68 430 aaPredicted RBP7.38□□□□□ -1.23
XCL1-201ENST00000367818 DDX3YO15523 660 aaKnown RBP7.37□□□□□ -1.23
XCL1-201ENST00000367818 GAS2O43903 313 aaKnown RBP7.37□□□□□ -1.23
XCL1-201ENST00000367818 RNF208Q9H0X6 261 aa7.37□□□□□ -1.23
XCL1-201ENST00000367818 MKRN1Q9UHC7 482 aaKnown RBP7.37□□□□□ -1.23
XCL1-201ENST00000367818 MROH2BQ7Z745 1585 aa7.37□□□□□ -1.23
XCL1-201ENST00000367818 BAZ1BQ9UIG0 1483 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms