RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ATP6V1AP38606 617 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 AMPD3Q01432 767 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 LUZP1Q86V48 1076 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 AOPEPQ8N6M6 819 aa18.4■□□□□ 0.54
PTPN11-201ENST00000351677 CCDC40Q4G0X9 1142 aa18.39■□□□□ 0.54
PTPN11-201ENST00000351677 PPP4R3BQ5MIZ7 849 aa18.39■□□□□ 0.54
PTPN11-201ENST00000351677 SPTY2D1Q68D10 685 aaPredicted RBP18.39■□□□□ 0.54
PTPN11-201ENST00000351677 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 MAP9Q49MG5 647 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 RFC4P35249 363 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 NPHP3Q7Z494 1330 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 ZMYM4Q5VZL5 1548 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 GNG11P61952 73 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 ESR2Q92731 530 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
PTPN11-201ENST00000351677 N4BP3O15049 544 aa18.38■□□□□ 0.53
PTPN11-201ENST00000351677 TCERG1LQ5VWI1 586 aa18.38■□□□□ 0.53
PTPN11-201ENST00000351677 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
PTPN11-201ENST00000351677 PAFAH1B1P43034 410 aa18.38■□□□□ 0.53
PTPN11-201ENST00000351677 HELBQ8NG08 1087 aaPredicted RBP18.38■□□□□ 0.53
PTPN11-201ENST00000351677 TTC12Q9H892 705 aaPredicted RBP18.38■□□□□ 0.53
PTPN11-201ENST00000351677 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
PTPN11-201ENST00000351677 NOLC1Q14978 699 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTPN11-201ENST00000351677 CNNM2Q9H8M5 875 aa18.38■□□□□ 0.53
PTPN11-201ENST00000351677 RNMTO43148 476 aaKnown RBP18.37■□□□□ 0.53
PTPN11-201ENST00000351677 GCP02774 474 aa18.37■□□□□ 0.53
PTPN11-201ENST00000351677 RNF113AO15541 343 aaKnown RBP18.37■□□□□ 0.53
PTPN11-201ENST00000351677 IL13P35225 146 aa18.37■□□□□ 0.53
PTPN11-201ENST00000351677 RRAGBQ5VZM2 374 aa18.37■□□□□ 0.53
PTPN11-201ENST00000351677 KIF20AO95235 890 aa18.37■□□□□ 0.53
PTPN11-201ENST00000351677 SKILP12757 684 aa18.37■□□□□ 0.53
PTPN11-201ENST00000351677 TRIM47Q96LD4 638 aa18.37■□□□□ 0.53
PTPN11-201ENST00000351677 IBSPP21815 317 aaPredicted RBP18.37■□□□□ 0.53
PTPN11-201ENST00000351677 TSPY3P0CV98 308 aa18.37■□□□□ 0.53
PTPN11-201ENST00000351677 TSPY8P0CW00 308 aa18.37■□□□□ 0.53
PTPN11-201ENST00000351677 NIP7Q9Y221 180 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPN11-201ENST00000351677 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
PTPN11-201ENST00000351677 CCDC113Q9H0I3 377 aa18.36■□□□□ 0.53
PTPN11-201ENST00000351677 KDM2BQ8NHM5 1336 aa18.36■□□□□ 0.53
PTPN11-201ENST00000351677 POTEJP0CG39 1038 aa18.36■□□□□ 0.53
PTPN11-201ENST00000351677 TYRO3Q06418 890 aa18.36■□□□□ 0.53
PTPN11-201ENST00000351677 PYM1Q9BRP8 204 aaKnown RBP18.36■□□□□ 0.53
PTPN11-201ENST00000351677 NAA16Q6N069 864 aaPredicted RBP18.36■□□□□ 0.53
PTPN11-201ENST00000351677 TMTC2Q8N394 836 aa18.36■□□□□ 0.53
PTPN11-201ENST00000351677 LIG1P18858 919 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 CLCN1P35523 988 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 PLCD4Q9BRC7 762 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 PTPDC1A2A3K4 754 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 SPTLC2O15270 562 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 KCNA6P17658 529 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 RXRAP19793 462 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 GOPCQ9HD26 462 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 CHMP4BP1P59074 171 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 HEATR3Q7Z4Q2 680 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 MIGA1Q8NAN2 632 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 PRIMPOLQ96LW4 560 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 EXOC1Q9NV70 894 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
PTPN11-201ENST00000351677 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 MCM3P25205 808 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 DZIP3Q86Y13 1208 aaKnown RBP18.34■□□□□ 0.53
PTPN11-201ENST00000351677 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 GOLGA6L7A0A1B0GV03 622 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 GOLGA6L9A6NEM1 432 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 NBPF7P0C2Y1 421 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-201ENST00000351677 STAT6P42226 847 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 FAM114A1Q8IWE2 563 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 DYNC1I1O14576 645 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 IP6K1Q92551 441 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
PTPN11-201ENST00000351677 IL2RBP14784 551 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 GBP2P32456 591 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-201ENST00000351677 ALS2CR12Q96Q35 445 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 SETDB2Q96T68 719 aa18.34■□□□□ 0.53
PTPN11-201ENST00000351677 HLA-DOAP06340 250 aa18.33■□□□□ 0.53
PTPN11-201ENST00000351677 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.53
PTPN11-201ENST00000351677 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.53
PTPN11-201ENST00000351677 CCDC171Q6TFL3 1326 aa18.33■□□□□ 0.53
PTPN11-201ENST00000351677 TMCO5BA8MYB1 307 aa18.33■□□□□ 0.53
PTPN11-201ENST00000351677 F8W031 263 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-201ENST00000351677 LMOD1P29536 600 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-201ENST00000351677 GSTO1P78417 241 aa18.33■□□□□ 0.52
PTPN11-201ENST00000351677 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
PTPN11-201ENST00000351677 JADE2Q9NQC1 790 aa18.33■□□□□ 0.52
PTPN11-201ENST00000351677 ZKSCAN5Q9Y2L8 839 aa18.33■□□□□ 0.52
PTPN11-201ENST00000351677 IRS4O14654 1257 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-201ENST00000351677 SYT1P21579 422 aa18.33■□□□□ 0.52
PTPN11-201ENST00000351677 ZNF622Q969S3 477 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTPN11-201ENST00000351677 DHX58Q96C10 678 aa18.33■□□□□ 0.52
PTPN11-201ENST00000351677 BCCIPQ9P287 314 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTPN11-201ENST00000351677 USP8P40818 1118 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 MAGEB6P1A0A0J9YX57 407 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 HMGB2P26583 209 aaKnown RBP18.32■□□□□ 0.52
PTPN11-201ENST00000351677 CETN2P41208 172 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 FEZ1Q99689 392 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 RMND1Q9NWS8 449 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 CCDC129Q6ZRS4 1044 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms