RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NOP2P46087 812 aaKnown RBP20.6■□□□□ 0.89
SMC4-201ENST00000344722 KIF5AQ12840 1032 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 MAP3K12Q12852 859 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 BRAPQ7Z569 592 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 CNGA4Q8IV77 575 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 RAD50Q92878 1312 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 CFAP43Q8NDM7 1665 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 ZEB2O60315 1214 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 MARCKSP29966 332 aaPredicted RBP20.59■□□□□ 0.89
SMC4-201ENST00000344722 UBE4AQ14139 1066 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 SCLT1Q96NL6 688 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 NOS1P29475 1434 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 NMIQ13287 307 aaPredicted RBP20.59■□□□□ 0.89
SMC4-201ENST00000344722 MCMDC2Q4G0Z9 681 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 C6orf163Q5TEZ5 329 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 STMN4Q9H169 189 aaPredicted RBP20.59■□□□□ 0.89
SMC4-201ENST00000344722 CATIPQ7Z7H3 387 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 LRRC2Q9BYS8 371 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 POTEJP0CG39 1038 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 VAV2P52735 878 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 CCDC40Q4G0X9 1142 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 AMOTQ4VCS5 1084 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 TCP11L1Q9NUJ3 509 aa20.59■□□□□ 0.89
SMC4-201ENST00000344722 AKR1B15C9JRZ8 316 aaPredicted RBP20.58■□□□□ 0.89
SMC4-201ENST00000344722 INPP5BP32019 993 aa20.58■□□□□ 0.89
SMC4-201ENST00000344722 ZSCAN26Q16670 478 aa20.58■□□□□ 0.89
SMC4-201ENST00000344722 SELENOOQ9BVL4 669 aa20.58■□□□□ 0.89
SMC4-201ENST00000344722 GUCA1BQ9UMX6 200 aa20.58■□□□□ 0.89
SMC4-201ENST00000344722 IBTKQ9P2D0 1353 aaPredicted RBP20.58■□□□□ 0.89
SMC4-201ENST00000344722 NPC1L1Q9UHC9 1359 aa20.58■□□□□ 0.89
SMC4-201ENST00000344722 PI4KAP2A4QPH2 592 aa20.58■□□□□ 0.89
SMC4-201ENST00000344722 MINDY4BA8MYZ0 360 aa20.58■□□□□ 0.89
SMC4-201ENST00000344722 PI4KAP1Q8N8J0 262 aa20.58■□□□□ 0.89
SMC4-201ENST00000344722 SEC63Q9UGP8 760 aaKnown RBP20.58■□□□□ 0.89
SMC4-201ENST00000344722 AFMP43652 599 aa20.57■□□□□ 0.88
SMC4-201ENST00000344722 CAPZA3Q96KX2 299 aa20.57■□□□□ 0.88
SMC4-201ENST00000344722 CALML4Q96GE6 196 aa20.57■□□□□ 0.88
SMC4-201ENST00000344722 SSR1P43307 286 aaKnown RBP20.57■□□□□ 0.88
SMC4-201ENST00000344722 HAND2P61296 217 aa20.57■□□□□ 0.88
SMC4-201ENST00000344722 TTF1Q15361 905 aaPredicted RBP20.57■□□□□ 0.88
SMC4-201ENST00000344722 UHRF1BP1Q6BDS2 1440 aa20.57■□□□□ 0.88
SMC4-201ENST00000344722 MYO1BO43795 1136 aa20.57■□□□□ 0.88
SMC4-201ENST00000344722 CCDC144CPQ8IYA2 1237 aa20.57■□□□□ 0.88
SMC4-201ENST00000344722 UBA7P41226 1012 aa20.56■□□□□ 0.88
SMC4-201ENST00000344722 KIAA0753Q2KHM9 967 aa20.56■□□□□ 0.88
SMC4-201ENST00000344722 NAPGQ99747 312 aaPredicted RBP20.56■□□□□ 0.88
SMC4-201ENST00000344722 PTPDC1A2A3K4 754 aa20.56■□□□□ 0.88
SMC4-201ENST00000344722 PRPF4BQ13523 1007 aaKnown RBP20.56■□□□□ 0.88
SMC4-201ENST00000344722 WDHD1O75717 1129 aaPredicted RBP20.56■□□□□ 0.88
SMC4-201ENST00000344722 KIF4AO95239 1232 aa20.56■□□□□ 0.88
SMC4-201ENST00000344722 NUTM2AQ8IVF1 878 aaPredicted RBP20.56■□□□□ 0.88
SMC4-201ENST00000344722 CPLX4Q7Z7G2 160 aa20.55■□□□□ 0.88
SMC4-201ENST00000344722 RAB11FIP4Q86YS3 637 aa20.55■□□□□ 0.88
SMC4-201ENST00000344722 TTF2Q9UNY4 1162 aaKnown RBP20.55■□□□□ 0.88
SMC4-201ENST00000344722 ELP1O95163 1332 aa20.55■□□□□ 0.88
SMC4-201ENST00000344722 CFAP58Q5T655 872 aa20.55■□□□□ 0.88
SMC4-201ENST00000344722 WAPLQ7Z5K2 1190 aa20.55■□□□□ 0.88
SMC4-201ENST00000344722 CCDC6Q16204 474 aa20.55■□□□□ 0.88
SMC4-201ENST00000344722 ATP2B2Q01814 1243 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 FBF1Q8TES7 1133 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 EXOC1Q9NV70 894 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 ZBTB43O43298 467 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 ATF3P18847 181 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 CCDC50Q8IVM0 306 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 GPR161Q8N6U8 529 aaKnown RBP20.54■□□□□ 0.88
SMC4-201ENST00000344722 LRRC27Q9C0I9 530 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 ANTXR1Q9H6X2 564 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 NAA25Q14CX7 972 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 ZNF287Q9HBT7 754 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 AOX1Q06278 1338 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 TSPYL6Q8N831 410 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 GPT2Q8TD30 523 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 DDX12PQ92771 950 aa20.54■□□□□ 0.88
SMC4-201ENST00000344722 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 ARHGAP6O43182 974 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 ZFYP08048 801 aaPredicted RBP20.53■□□□□ 0.88
SMC4-201ENST00000344722 CCDC85AQ96PX6 553 aaPredicted RBP20.53■□□□□ 0.88
SMC4-201ENST00000344722 NDUFAB1O14561 156 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 PSMA7O14818 248 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 IGHMBP2P38935 993 aaKnown RBP20.53■□□□□ 0.88
SMC4-201ENST00000344722 ARHGAP25P42331 645 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 FANCCQ00597 558 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 TSGA10Q9BZW7 698 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 RASAL2Q9UJF2 1139 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 RANBP6O60518 1105 aaKnown RBP20.53■□□□□ 0.88
SMC4-201ENST00000344722 KCNH5Q8NCM2 988 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 TTC14Q96N46 770 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
SMC4-201ENST00000344722 GOLGA6CA6NDK9 693 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 WASLO00401 505 aaPredicted RBP20.53■□□□□ 0.88
SMC4-201ENST00000344722 GOLGA6DP0CG33 693 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 CCDC42Q96M95 316 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 GOLGA6AQ9NYA3 693 aa20.53■□□□□ 0.88
SMC4-201ENST00000344722 KIF5BP33176 963 aa20.52■□□□□ 0.88
SMC4-201ENST00000344722 PLB1Q6P1J6 1458 aa20.52■□□□□ 0.88
SMC4-201ENST00000344722 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.88
SMC4-201ENST00000344722 ALDH1L1O75891 902 aa20.52■□□□□ 0.88
SMC4-201ENST00000344722 IFIT5Q13325 482 aaKnown RBP20.52■□□□□ 0.88
SMC4-201ENST00000344722 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms