RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 BICD2Q8TD16 824 aa20.61■□□□□ 0.89
COL9A1-201ENST00000320755 GTF3C6Q969F1 213 aa20.61■□□□□ 0.89
COL9A1-201ENST00000320755 HSPA2P54652 639 aa20.61■□□□□ 0.89
COL9A1-201ENST00000320755 TSGA10IPQ3SY00 556 aa20.61■□□□□ 0.89
COL9A1-201ENST00000320755 APOBRQ0VD83 1088 aa20.6■□□□□ 0.89
COL9A1-201ENST00000320755 MAP3K11Q16584 847 aa20.6■□□□□ 0.89
COL9A1-201ENST00000320755 FAM13BQ9NYF5 915 aa20.6■□□□□ 0.89
COL9A1-201ENST00000320755 UQCRHLA0A096LP55 91 aa20.6■□□□□ 0.89
COL9A1-201ENST00000320755 UQCRHP07919 91 aa20.6■□□□□ 0.89
COL9A1-201ENST00000320755 LEO1Q8WVC0 666 aaPredicted RBP20.6■□□□□ 0.89
COL9A1-201ENST00000320755 TNMDQ9H2S6 317 aa20.6■□□□□ 0.89
COL9A1-201ENST00000320755 CAMTA1Q9Y6Y1 1673 aa20.6■□□□□ 0.89
COL9A1-201ENST00000320755 SCAND2PQ9GZW5 306 aaPredicted RBP20.59■□□□□ 0.89
COL9A1-201ENST00000320755 IFIT1P09914 478 aaKnown RBP20.59■□□□□ 0.89
COL9A1-201ENST00000320755 SCRN1Q12765 414 aa20.59■□□□□ 0.89
COL9A1-201ENST00000320755 SPATA31A3Q5VYP0 1347 aa20.59■□□□□ 0.89
COL9A1-201ENST00000320755 NCOA5Q9HCD5 579 aaKnown RBP20.59■□□□□ 0.89
COL9A1-201ENST00000320755 GORABQ5T7V8 394 aa20.58■□□□□ 0.89
COL9A1-201ENST00000320755 LUZP1Q86V48 1076 aa20.58■□□□□ 0.89
COL9A1-201ENST00000320755 A0A1B0GUL7 405 aa20.58■□□□□ 0.88
COL9A1-201ENST00000320755 GUCY1B3Q02153 619 aa20.58■□□□□ 0.88
COL9A1-201ENST00000320755 TTLL5Q6EMB2 1281 aa20.57■□□□□ 0.88
COL9A1-201ENST00000320755 AFDNP55196 1824 aaKnown RBP20.57■□□□□ 0.88
COL9A1-201ENST00000320755 ADAMTS7Q9UKP4 1686 aa20.57■□□□□ 0.88
COL9A1-201ENST00000320755 ALDH8A1Q9H2A2 487 aaPredicted RBP20.57■□□□□ 0.88
COL9A1-201ENST00000320755 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
COL9A1-201ENST00000320755 RRP9O43818 475 aaKnown RBP20.57■□□□□ 0.88
COL9A1-201ENST00000320755 NR1I2O75469 434 aa20.57■□□□□ 0.88
COL9A1-201ENST00000320755 IL15P40933 162 aaPredicted RBP20.57■□□□□ 0.88
COL9A1-201ENST00000320755 TYRO3Q06418 890 aa20.57■□□□□ 0.88
COL9A1-201ENST00000320755 HSP90AB3PQ58FF7 597 aa20.57■□□□□ 0.88
COL9A1-201ENST00000320755 ALS2Q96Q42 1657 aa20.57■□□□□ 0.88
COL9A1-201ENST00000320755 ADAMTSL3P82987 1691 aa20.56■□□□□ 0.88
COL9A1-201ENST00000320755 EYA2O00167 538 aa20.56■□□□□ 0.88
COL9A1-201ENST00000320755 FTOQ9C0B1 505 aaKnown RBP eCLIP20.56■□□□□ 0.88
COL9A1-201ENST00000320755 TNS3Q68CZ2 1445 aa20.56■□□□□ 0.88
COL9A1-201ENST00000320755 HAND2P61296 217 aa20.56■□□□□ 0.88
COL9A1-201ENST00000320755 PGBD1Q96JS3 809 aa20.56■□□□□ 0.88
COL9A1-201ENST00000320755 ARID3AQ99856 593 aa20.56■□□□□ 0.88
COL9A1-201ENST00000320755 KIF1AQ12756 1690 aa20.56■□□□□ 0.88
COL9A1-201ENST00000320755 JCADQ9P266 1359 aa20.55■□□□□ 0.88
COL9A1-201ENST00000320755 DHX32Q7L7V1 743 aaKnown RBP20.55■□□□□ 0.88
COL9A1-201ENST00000320755 HSPD1P10809 573 aaKnown RBP20.55■□□□□ 0.88
COL9A1-201ENST00000320755 PRKCSHP14314 528 aaPredicted RBP20.55■□□□□ 0.88
COL9A1-201ENST00000320755 WASHC4Q2M389 1173 aa20.55■□□□□ 0.88
COL9A1-201ENST00000320755 ANO6Q4KMQ2 910 aa20.55■□□□□ 0.88
COL9A1-201ENST00000320755 CEP126Q9P2H0 1117 aa20.55■□□□□ 0.88
COL9A1-201ENST00000320755 NOLC1Q14978 699 aaKnown RBP eCLIP20.55■□□□□ 0.88
COL9A1-201ENST00000320755 FAM89AQ96GI7 184 aa20.55■□□□□ 0.88
COL9A1-201ENST00000320755 MRVI1Q9Y6F6 885 aa20.55■□□□□ 0.88
COL9A1-201ENST00000320755 PCDH11XQ9BZA7 1347 aa20.54■□□□□ 0.88
COL9A1-201ENST00000320755 PCDH11YQ9BZA8 1340 aa20.54■□□□□ 0.88
COL9A1-201ENST00000320755 ELP1O95163 1332 aa20.54■□□□□ 0.88
COL9A1-201ENST00000320755 KAT6BQ8WYB5 2073 aa20.54■□□□□ 0.88
COL9A1-201ENST00000320755 MRC1P22897 1456 aa20.54■□□□□ 0.88
COL9A1-201ENST00000320755 ADORA1P30542 326 aa20.54■□□□□ 0.88
COL9A1-201ENST00000320755 CCDC57Q2TAC2 916 aa20.54■□□□□ 0.88
COL9A1-201ENST00000320755 PDIA4P13667 645 aaKnown RBP20.53■□□□□ 0.88
COL9A1-201ENST00000320755 EVA1CP58658 441 aa20.53■□□□□ 0.88
COL9A1-201ENST00000320755 TAF7LQ5H9L4 462 aa20.53■□□□□ 0.88
COL9A1-201ENST00000320755 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
COL9A1-201ENST00000320755 GPHNQ9NQX3 736 aaPredicted RBP20.53■□□□□ 0.88
COL9A1-201ENST00000320755 E7EWF7 191 aa20.53■□□□□ 0.88
COL9A1-201ENST00000320755 RESTQ13127 1097 aa20.53■□□□□ 0.88
COL9A1-201ENST00000320755 RAB11FIP4Q86YS3 637 aa20.53■□□□□ 0.88
COL9A1-201ENST00000320755 FAM200AQ8TCP9 573 aa20.53■□□□□ 0.88
COL9A1-201ENST00000320755 ZMYM1Q5SVZ6 1142 aa20.52■□□□□ 0.88
COL9A1-201ENST00000320755 SYNE4Q8N205 404 aa20.52■□□□□ 0.88
COL9A1-201ENST00000320755 HELLSQ9NRZ9 838 aa20.52■□□□□ 0.88
COL9A1-201ENST00000320755 SH3TC1Q8TE82 1336 aa20.52■□□□□ 0.88
COL9A1-201ENST00000320755 PTPDC1A2A3K4 754 aa20.52■□□□□ 0.88
COL9A1-201ENST00000320755 M0R2C6 588 aa20.52■□□□□ 0.88
COL9A1-201ENST00000320755 RNF113AO15541 343 aaKnown RBP20.52■□□□□ 0.88
COL9A1-201ENST00000320755 DRC7Q8IY82 874 aa20.52■□□□□ 0.88
COL9A1-201ENST00000320755 MAST3O60307 1309 aa20.52■□□□□ 0.88
COL9A1-201ENST00000320755 NSUN7Q8NE18 718 aaKnown RBP20.52■□□□□ 0.87
COL9A1-201ENST00000320755 WDR17Q8IZU2 1322 aa20.52■□□□□ 0.87
COL9A1-201ENST00000320755 TTC39AQ5SRH9 613 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 PI16Q6UXB8 463 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 BRINP3Q76B58 766 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 PIBF1Q8WXW3 757 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 OSBP2Q969R2 916 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 CTDNEP1O95476 244 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 SASS6Q6UVJ0 657 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 CBX8Q9HC52 389 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 ARFGEF2Q9Y6D5 1785 aa20.51■□□□□ 0.87
COL9A1-201ENST00000320755 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 PFKFB2O60825 505 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 IL2RBP14784 551 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 GPTP24298 496 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 DNAJC25Q9H1X3 360 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 COL18A1P39060 1754 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 HMGB1P09429 215 aaKnown RBP20.5■□□□□ 0.87
COL9A1-201ENST00000320755 DDX19AQ9NUU7 478 aaKnown RBP20.5■□□□□ 0.87
COL9A1-201ENST00000320755 LMTK3Q96Q04 1460 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 TSC1Q92574 1164 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 DSCC1Q9BVC3 393 aa20.5■□□□□ 0.87
COL9A1-201ENST00000320755 A0A087WWV3 80 aa20.49■□□□□ 0.87
COL9A1-201ENST00000320755 CCDC158Q5M9N0 1113 aa20.49■□□□□ 0.87
COL9A1-201ENST00000320755 FBXW7Q969H0 707 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms