RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 ARHGAP23Q9P227 1491 aa13.98□□□□□ -0.17
SLC13A3-201ENST00000279027 EXOC5O00471 708 aa13.98□□□□□ -0.17
SLC13A3-201ENST00000279027 ATP5JP18859 108 aa13.98□□□□□ -0.17
SLC13A3-201ENST00000279027 ZNF592Q92610 1267 aa13.98□□□□□ -0.17
SLC13A3-201ENST00000279027 COPRSQ9NQ92 184 aa13.98□□□□□ -0.17
SLC13A3-201ENST00000279027 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
SLC13A3-201ENST00000279027 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
SLC13A3-201ENST00000279027 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 STK38Q15208 465 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 IMMTQ16891 758 aaKnown RBP13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 SYNE3Q6ZMZ3 975 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 VPS37DQ86XT2 251 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 ERCC4Q92889 916 aaPredicted RBP13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 CYP21A2P08686 494 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 ATP2B3Q16720 1220 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 KBTBD3Q8NAB2 608 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 TTC14Q96N46 770 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 HMG20BQ9P0W2 317 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 ISM2Q6H9L7 571 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 XAGE2Q96GT9 111 aa13.97□□□□□ -0.17
SLC13A3-201ENST00000279027 GOLGA8BA8MQT2 603 aa13.96□□□□□ -0.17
SLC13A3-201ENST00000279027 SNAP23O00161 211 aa13.96□□□□□ -0.17
SLC13A3-201ENST00000279027 KINO60870 393 aaKnown RBP13.96□□□□□ -0.17
SLC13A3-201ENST00000279027 LIG1P18858 919 aa13.96□□□□□ -0.17
SLC13A3-201ENST00000279027 ZAP70P43403 619 aa13.96□□□□□ -0.17
SLC13A3-201ENST00000279027 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
SLC13A3-201ENST00000279027 SLIT1O75093 1534 aa13.96□□□□□ -0.18
SLC13A3-201ENST00000279027 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.18
SLC13A3-201ENST00000279027 LETM1O95202 739 aaPredicted RBP13.96□□□□□ -0.18
SLC13A3-201ENST00000279027 AKAP2Q9Y2D5 859 aa13.96□□□□□ -0.18
SLC13A3-201ENST00000279027 KIF13AQ9H1H9 1805 aa13.96□□□□□ -0.18
SLC13A3-201ENST00000279027 GOLGA6L6A8MZA4 724 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 ZNF213O14771 459 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 SLC9C2Q5TAH2 1124 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 TTC6Q86TZ1 520 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 A0A087WWV3 80 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 A0A0G2JLW4 131 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 RNF113AO15541 343 aaKnown RBP13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 CHAF1AQ13111 956 aaPredicted RBP13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 SLC4A8Q2Y0W8 1093 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 SCAND2PQ9GZW5 306 aaPredicted RBP13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 LUZP1Q86V48 1076 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 MICU3Q86XE3 530 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 NUP133Q8WUM0 1156 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 PIBF1Q8WXW3 757 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 AIDAQ96BJ3 306 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 FTOQ9C0B1 505 aaKnown RBP eCLIP13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 VIRMAQ69YN4 1812 aaKnown RBP13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 AKAP12Q02952 1782 aa13.95□□□□□ -0.18
SLC13A3-201ENST00000279027 PTPDC1A2A3K4 754 aa13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 IRS4O14654 1257 aaPredicted RBP13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 SPATA31A3Q5VYP0 1347 aa13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 PIK3C2AO00443 1686 aa13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 FER1L4A9Z1Z3 1794 aa13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 BIN1O00499 593 aa13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 ITGA6P23229 1130 aa13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 CREBRFQ8IUR6 639 aa13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 CCDC191Q8NCU4 936 aa13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 SETD1AO15047 1707 aaKnown RBP13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 DHX32Q7L7V1 743 aaKnown RBP13.94□□□□□ -0.18
SLC13A3-201ENST00000279027 CPLX2Q6PUV4 134 aaKnown RBP13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 KCNQ4P56696 695 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 ANO6Q4KMQ2 910 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 FILIP1Q7Z7B0 1213 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 CCDC24Q8N4L8 307 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 TM6SF1Q9BZW5 370 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 DNAJC25Q9H1X3 360 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 MINDY4BA8MYZ0 360 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 DZIP3Q86Y13 1208 aaKnown RBP13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 HAUS7Q99871 368 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 LRP2BPQ9P2M1 347 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 ORC3Q9UBD5 711 aaPredicted RBP13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 CTNNA3Q9UI47 895 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 CFAP45Q9UL16 551 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 UQCRHLA0A096LP55 91 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 UQCRHP07919 91 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 GLIPR1L2Q4G1C9 344 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 C8orf76Q96K31 380 aa13.93□□□□□ -0.18
SLC13A3-201ENST00000279027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.181e-9■□□□□ 8.3
SLC13A3-201ENST00000279027 TCIRG1Q13488 830 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 TRIM29Q14134 588 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 CCAR1Q8IX12 1150 aaKnown RBP13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 TDO2P48775 406 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 CLEC17AQ6ZS10 378 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 FSIP1Q8NA03 581 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 WDR17Q8IZU2 1322 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 PRC1O43663 620 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 HSPD1P10809 573 aaKnown RBP13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 HLFQ16534 295 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 ZKSCAN5Q9Y2L8 839 aa13.92□□□□□ -0.18
SLC13A3-201ENST00000279027 PIGBQ92521 554 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 ZNF396Q96N95 335 aaPredicted RBP13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 GREM2Q9H772 168 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 E7EWF7 191 aa13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
SLC13A3-201ENST00000279027 MIGA1Q8NAN2 632 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms