RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 TDRD7Q8NHU6 1098 aaKnown RBP13.03□□□□□ -0.32
ACTN1-201ENST00000193403 ANKRD7Q92527 254 aa13.03□□□□□ -0.32
ACTN1-201ENST00000193403 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
ACTN1-201ENST00000193403 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
ACTN1-201ENST00000193403 SLC3A2P08195 630 aaKnown RBP13.03□□□□□ -0.32
ACTN1-201ENST00000193403 GOLGA8FQ08AF8 430 aa13.03□□□□□ -0.32
ACTN1-201ENST00000193403 GOLGA8DPQ0D2H9 430 aa13.03□□□□□ -0.32
ACTN1-201ENST00000193403 SLFNL1Q499Z3 407 aa13.03□□□□□ -0.32
ACTN1-201ENST00000193403 UBE3BQ7Z3V4 1068 aa13.03□□□□□ -0.32
ACTN1-201ENST00000193403 NEMFO60524 1076 aa13.02□□□□□ -0.32
ACTN1-201ENST00000193403 NECTIN1Q15223 517 aa13.02□□□□□ -0.32
ACTN1-201ENST00000193403 ERO1AQ96HE7 468 aa13.02□□□□□ -0.32
ACTN1-201ENST00000193403 CPS1P31327 1500 aa13.02□□□□□ -0.32
ACTN1-201ENST00000193403 MAP2P11137 1827 aaKnown RBP13.02□□□□□ -0.32
ACTN1-201ENST00000193403 DEPDC5O75140 1603 aa13.02□□□□□ -0.32
ACTN1-201ENST00000193403 HOXC9P31274 260 aa13.02□□□□□ -0.33
ACTN1-201ENST00000193403 BMS1Q14692 1282 aaKnown RBP13.02□□□□□ -0.33
ACTN1-201ENST00000193403 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-201ENST00000193403 RALYLQ86SE5 291 aaKnown RBP13.02□□□□□ -0.33
ACTN1-201ENST00000193403 TM6SF1Q9BZW5 370 aa13.02□□□□□ -0.33
ACTN1-201ENST00000193403 GABPB1Q06547 395 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-201ENST00000193403 ST3GAL1Q11201 340 aa13.02□□□□□ -0.33
ACTN1-201ENST00000193403 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-201ENST00000193403 TAF3Q5VWG9 929 aa13.02□□□□□ -0.33
ACTN1-201ENST00000193403 MTMR7Q9Y216 660 aa13.02□□□□□ -0.33
ACTN1-201ENST00000193403 ARHGEF28Q8N1W1 1705 aaKnown RBP13.01□□□□□ -0.33
ACTN1-201ENST00000193403 CTAGE5O15320 804 aa13.01□□□□□ -0.33
ACTN1-201ENST00000193403 C8orf76Q96K31 380 aa13.01□□□□□ -0.33
ACTN1-201ENST00000193403 XPO4Q9C0E2 1151 aaKnown RBP13.01□□□□□ -0.33
ACTN1-201ENST00000193403 ZSCAN16Q9H4T2 348 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-201ENST00000193403 DDX41Q9UJV9 622 aaKnown RBP13.01□□□□□ -0.33
ACTN1-201ENST00000193403 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
ACTN1-201ENST00000193403 MRPS27Q92552 414 aaKnown RBP13.01□□□□□ -0.33
ACTN1-201ENST00000193403 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
ACTN1-201ENST00000193403 GSDMDP57764 484 aa13.01□□□□□ -0.33
ACTN1-201ENST00000193403 MAP4K1Q92918 833 aa13.01□□□□□ -0.33
ACTN1-201ENST00000193403 CRB1P82279 1406 aa13.01□□□□□ -0.33
ACTN1-201ENST00000193403 REREQ9P2R6 1566 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 GPS2Q13227 327 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 NEK11Q8NG66 645 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 PPLO60437 1756 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
ACTN1-201ENST00000193403 TFCP2Q12800 502 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 POLA2Q14181 598 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 OLFM4Q6UX06 510 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 KSR2Q6VAB6 950 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 HMG20BQ9P0W2 317 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 CLTCQ00610 1675 aaKnown RBP13□□□□□ -0.33
ACTN1-201ENST00000193403 GNG11P61952 73 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 PLA2G4DQ86XP0 818 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 DBNDD2Q9BQY9 259 aa13□□□□□ -0.33
ACTN1-201ENST00000193403 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
ACTN1-201ENST00000193403 U3KPZ7 1027 aaPredicted RBP13□□□□□ -0.33
ACTN1-201ENST00000193403 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 NUTM2BA6NNL0 878 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 NUTM2EB1AL46 878 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 TOB2Q14106 344 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 CHRNA2Q15822 529 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 CPLX3Q8WVH0 158 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 CARD6Q9BX69 1037 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 ROBO2Q9HCK4 1378 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 CTIFO43310 598 aaKnown RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 TOP1P11387 765 aaKnown RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 RXRAP19793 462 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 FAM160A1Q05DH4 1040 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 SCRN1Q12765 414 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 GOLGA8BA8MQT2 603 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 SEC31AO94979 1220 aaKnown RBP12.99□□□□□ -0.33
ACTN1-201ENST00000193403 EPC1Q9H2F5 836 aa12.99□□□□□ -0.33
ACTN1-201ENST00000193403 DPCR1Q3MIW9 517 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 ORC3Q9UBD5 711 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-201ENST00000193403 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 ELP1O95163 1332 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 CAVIN2O95810 425 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 UBASH3AP57075 661 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 TERF2Q15554 542 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 XAGE3Q8WTP9 111 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 GOLPH3LQ9H4A5 285 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 SASH1O94885 1247 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 PDIA4P13667 645 aaKnown RBP12.98□□□□□ -0.33
ACTN1-201ENST00000193403 LMAN1P49257 510 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
ACTN1-201ENST00000193403 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 SBNO1A3KN83 1393 aa12.98□□□□□ -0.33
ACTN1-201ENST00000193403 ALKQ9UM73 1620 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
ACTN1-201ENST00000193403 TRIM34Q9BYJ4 488 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 GJB4Q9NTQ9 266 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 A0A087WZG4 1122 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-201ENST00000193403 LMTK2Q8IWU2 1503 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms