RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Cops6O88545 324 aa32.98■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Nap1l3Q794H2 544 aa32.98■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Zbtb38Q3LR78 1197 aa32.98■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Ctdnep1Q3TP92 244 aa32.98■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Zkscan8Q8BSL0 588 aa32.98■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Lmbrd2Q8C561 694 aa32.98■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Rbm17Q8JZX4 405 aaKnown RBP32.98■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Gpr182P43142 395 aa32.97■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Ltv1Q6NSQ7 470 aaKnown RBP32.97■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Znf526Q8BI66 675 aa32.97■■■□□ 2.87
Ldb1-208ENSMUST00000185355 EappQ5BU09 281 aa32.97■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Ankrd23Q812A3 306 aa32.97■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Lrp5Q91VN0 1614 aa32.96■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Tbc1d30Q69ZT9 766 aa32.96■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Fam160b2Q80YR2 744 aa32.96■■■□□ 2.87
Ldb1-208ENSMUST00000185355 ZwintQ9CQU5 252 aa32.96■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Kcnq5Q9JK45 933 aa32.96■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Hap1O35668 628 aa32.95■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Gm21985Q6P6P5 1106 aa32.95■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Me3Q8BMF3 604 aa32.95■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Iffo2Q8R2V2 512 aa32.95■■■□□ 2.87
Ldb1-208ENSMUST00000185355 Nwd2Q6P5U7 1742 aa32.95■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Atp2b3Q0VF55 1220 aa32.94■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Zscan22Q8BGS5 496 aa32.94■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Nup88Q8CEC0 753 aaKnown RBP32.94■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Plcd4Q8K3R3 807 aa32.94■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Rapgef4Q9EQZ6 1011 aa32.94■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Foxo4Q9WVH3 505 aa32.93■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Usp42B2RQC2 1324 aaKnown RBP32.93■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Trim34bJ3QNR8 485 aa32.93■■■□□ 2.86
Ldb1-208ENSMUST00000185355 BrapQ99MP8 591 aa32.93■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Samm50Q8BGH2 469 aa32.92■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Atad2Q8CDM1 1040 aa32.92■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Fer1l6E0CZ42 1862 aa32.92■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Fam184aE9PW83 1143 aa32.92■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Cd22P35329 862 aa32.92■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Exosc10P56960 887 aaKnown RBP32.92■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Esyt1Q3U7R1 1092 aaKnown RBP32.92■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Riok1Q922Q2 567 aa32.92■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Rtn4Q99P72 1162 aaKnown RBP32.91■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Carmil3Q3UFQ8 1375 aa32.91■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Fbxo3Q9DC63 480 aa32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Rcan3Q9JKK0 239 aa32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Ccne2Q9Z238 404 aa32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Prr29B1ARI9 187 aa32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 TrdnE9Q9K5 693 aa32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Dhx16G3X8X0 1044 aaKnown RBP32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Rnf214Q8BFU3 668 aaKnown RBP32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Pm20d1Q8C165 503 aa32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Fam84aQ9D650 292 aa32.9■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Trim56Q80VI1 734 aaKnown RBP32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Ncaph2Q8BSP2 607 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Ift57Q8BXG3 429 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Bcl2l12Q9D3J3 255 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Appbp2Q9DAX9 585 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Prr5lA2AVJ5 370 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Anxa1P10107 346 aaKnown RBP32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Babam1Q3UI43 333 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Smarcc2Q6PDG5 1213 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Wdr24Q8CFJ9 790 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Ipo4Q8VI75 1082 aa32.89■■■□□ 2.86
Ldb1-208ENSMUST00000185355 Limch1Q3UH68 1057 aa32.88■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Map10Q8BJS7 891 aa32.88■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Tmem67Q8BR76 992 aa32.88■■■□□ 2.85
Ldb1-208ENSMUST00000185355 R3hcc1Q8BSI6 488 aa32.88■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Naa30Q8CES0 364 aa32.88■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Fez1Q8K0X8 392 aa32.88■■■□□ 2.85
Ldb1-208ENSMUST00000185355 PdcQ9QW08 244 aa32.88■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Lama4P97927 1816 aa32.88■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Cfap44E9Q5M6 1843 aa32.87■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Cnnm3Q32NY4 713 aa32.87■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Il17raQ60943 864 aa32.87■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Itga6Q61739 1091 aa32.87■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Cyp7a1Q64505 503 aa32.87■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Rab3gap1Q80UJ7 981 aa32.86■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Plcd1Q8R3B1 756 aa32.86■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Ube3bQ9ES34 1070 aa32.86■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Pcmtd1P59913 357 aa32.86■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Ddrgk1Q80WW9 315 aa32.86■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Srgap1Q91Z69 1062 aa32.86■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Erich6bQ9D4S6 220 aa32.86■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Vps33bP59016 617 aa32.85■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Plbd2Q3TCN2 594 aa32.85■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Ano1Q8BHY3 960 aa32.85■■■□□ 2.85
Ldb1-208ENSMUST00000185355 E4f1Q8CCE9 783 aa32.85■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Ddb1Q3U1J4 1140 aaKnown RBP32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Pms1Q8K119 917 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Adam1bQ8R534 806 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Sik3Q6P4S6 1311 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Pde8bE9Q4S1 865 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Zfp51Q3U4L8 781 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Slc38a10Q5I012 1090 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Nlrp9aQ66X03 949 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Amer1Q7TS75 1132 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Pes1Q9EQ61 584 aaKnown RBP32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Krt85Q9Z2T6 507 aa32.84■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Zscan25B2RX31 543 aa32.83■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Paxip1Q6NZQ4 1056 aa32.83■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Pdcl3Q8BVF2 240 aa32.83■■■□□ 2.85
Ldb1-208ENSMUST00000185355 Sept1P42209 366 aa32.82■■■□□ 2.85
Retrieved 100 of 22,080 RNA–protein pairs in 102.9 ms