RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Ythdc1E9Q5K9 736 aaKnown RBP17.35■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Fam170aQ66LM6 333 aa17.35■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Sptlc3Q8BG54 563 aa17.35■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Lmod1Q8BVA4 595 aa17.35■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Mb21d2Q8C525 428 aa17.35■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Ripk4Q9ERK0 786 aa17.35■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Tnrc6cQ3UHC0 1690 aaKnown RBP17.34■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Cers3Q1A3B0 383 aa17.34■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Taok3Q8BYC6 898 aa17.34■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Casp1P29452 402 aa17.34■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Nwd2Q6P5U7 1742 aa17.34■□□□□ 0.37
Rnf4-207ENSMUST00000182709 St18Q80TY4 1045 aa17.34■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Fam102bQ8BQS4 339 aa17.34■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Sgsm2Q80U12 1005 aa17.33■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Tmem266Q8BZB3 538 aa17.33■□□□□ 0.37
Rnf4-207ENSMUST00000182709 Smarce1O54941 411 aaKnown RBP17.33■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Plcb3P51432 1234 aaKnown RBP17.33■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Ubxn10Q8BG34 277 aa17.33■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Tmem143Q8VD26 458 aa17.33■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Rps6ka4Q9Z2B9 773 aa17.33■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Gadd45bP22339 160 aa17.32■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Rbm27Q5SFM8 1060 aaKnown RBP17.32■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Emilin1Q99K41 1017 aa17.32■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Irgm2A0A140LIF8 407 aa17.32■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Syt1P46096 421 aa17.32■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Nek11Q8C0Q4 628 aa17.32■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Ciao1Q99KN2 339 aa17.32■□□□□ 0.36
Rnf4-207ENSMUST00000182709 PhaxQ9JJT9 385 aaKnown RBP17.32■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Vps33bP59016 617 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Rnf20Q5DTM8 973 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Nlrp9aQ66X03 949 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Spty2d1Q68FG3 682 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Hoxa7P02830 229 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Pde8bE9Q4S1 865 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Snai1Q02085 264 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 IntuQ059U7 942 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Tmem67Q8BR76 992 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Atf7Q8R0S1 413 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Erc1Q99MI1 1120 aa17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Smc3Q9CW03 1217 aaKnown RBP17.31■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Shank3Q4ACU6 1730 aa17.3■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Atp6v1dP57746 247 aa17.3■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Marf1Q8BJ34 1730 aaKnown RBP17.3■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Pla2g4fQ50L41 855 aa17.3■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Zfp91Q62511 572 aa17.3■□□□□ 0.36
Rnf4-207ENSMUST00000182709 ZyxQ62523 564 aa17.3■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Pes1Q9EQ61 584 aaKnown RBP17.3■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Plekho1Q9JIY0 408 aa17.3■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Bms1Q6PGF5 1284 aaKnown RBP17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Slc39a11Q8BWY7 342 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 AidaQ8C4Q6 305 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Fer1l6E0CZ42 1862 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 PnnO35691 725 aaKnown RBP17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 PtmaP26350 111 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Snrpa1P57784 255 aaKnown RBP17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Ufl1Q8CCJ3 793 aaKnown RBP17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Cntnap1O54991 1385 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Cyp3a57D3YYZ0 503 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Hspd1P63038 573 aaKnown RBP17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Atp8a2P98200 1148 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Znf496Q5SXI5 585 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Tmx3Q8BXZ1 456 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Iffo2Q8R2V2 512 aa17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Rbm5Q91YE7 815 aaKnown RBP17.29■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Mad1l1Q9WTX8 717 aaKnown RBP17.28■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Rnf123Q5XPI3 1314 aa17.28■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Rdm1Q9CQK3 281 aa17.28■□□□□ 0.36
Rnf4-207ENSMUST00000182709 AtrnQ9WU60 1428 aa17.28■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Slc38a10Q5I012 1090 aa17.27■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Ankrd13dQ6PD24 605 aa17.27■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Gimap8Q75N62 688 aa17.27■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Sp8Q8BMJ8 486 aa17.27■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Ccdc158Q8CDI6 1109 aa17.27■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Kiaa0319lQ8K135 1048 aa17.27■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Gja10Q9WUS4 505 aa17.27■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Mrc1Q61830 1456 aa17.27■□□□□ 0.36
Rnf4-207ENSMUST00000182709 Fkbp1aP26883 108 aaKnown RBP17.27■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Cct2P80314 535 aaKnown RBP17.27■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Nom1Q3UFM5 854 aaKnown RBP17.27■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Edrf1Q6GQV7 1239 aa17.27■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Zcrb1Q9CZ96 217 aaKnown RBP17.27■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Washc4Q3UMB9 1173 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 HmcesQ8R1M0 353 aaKnown RBP17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Ush1cQ9ES64 910 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Psma5Q9Z2U1 241 aaKnown RBP17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Naa30Q8CES0 364 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Ccdc7Q9D541 371 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Lrp6O88572 1613 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Tbc1d4Q8BYJ6 1307 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Sept1P42209 366 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Map10Q8BJS7 891 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 RtcbQ99LF4 505 aaKnown RBP17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Foxo3Q9WVH4 672 aa17.26■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Gm45015A0A140LII9 184 aa17.25■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Gm18336A0A140LIU8 765 aa17.25■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Zbtb7aO88939 569 aaKnown RBP17.25■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Gse1Q3U3C9 1213 aa17.25■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Rps6kb1Q8BSK8 525 aa17.25■□□□□ 0.35
Rnf4-207ENSMUST00000182709 Clstn1Q9EPL2 979 aa17.25■□□□□ 0.35
Rnf4-207ENSMUST00000182709 1700029H14RikE9PY36 240 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms