RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Rasgrp4Q8BTM9 673 aa17.48■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Plekhg6Q8R0J1 787 aa17.48■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Duxf3A0A0N4SV92 674 aa17.47■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Vsig10D3YX43 558 aa17.47■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Rab3gap1Q80UJ7 981 aa17.47■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Srgap3Q812A2 1099 aa17.47■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Chmp4bQ9D8B3 224 aaKnown RBP17.47■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Tspoap1Q7TNF8 1846 aa17.47■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Plbd2Q3TCN2 594 aa17.46■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Zkscan8Q8BSL0 588 aa17.46■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Slc14a2Q8R4T9 930 aa17.46■□□□□ 0.39
Ccdc171-204ENSMUST00000126429 Btaf1E9QAE3 1848 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Brpf1B2RRD7 1212 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 GabrdP22933 449 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Ets1P27577 440 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 VegfbP49766 207 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Dis3l2Q8CI75 870 aaKnown RBP17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Plcd4Q8K3R3 807 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Col26a1Q91VF6 440 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Ciao1Q99KN2 339 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Sh3bp5lQ99LH9 392 aa17.45■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Slc4a9E9PUP3 929 aa17.44■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Atp8a2P98200 1148 aa17.44■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Zc3h15Q3TIV5 426 aaKnown RBP17.44■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Ell2Q3UKU1 639 aa17.44■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Usp48Q3V0C5 1052 aa17.44■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Rrs1Q9CYH6 365 aaKnown RBP17.44■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Osbpl5Q9ER64 874 aa17.44■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Ly6iQ9WU67 134 aa17.44■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Pde8bE9Q4S1 865 aa17.43■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Rbm27Q5SFM8 1060 aaKnown RBP17.43■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Fam13aQ8BGI4 693 aa17.43■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Tmc2Q8R4P4 888 aa17.43■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Ltn1Q6A009 1767 aa17.42■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Casp1P29452 402 aa17.42■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Plagl1Q9JLQ4 704 aa17.42■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Nrxn2E9Q7X7 1710 aa17.42■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Tpx2A2APB8 745 aaKnown RBP17.41■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Ccdc51Q3URS9 406 aa17.41■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Glis3Q6XP49 780 aa17.41■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Edc3Q8K2D3 508 aaKnown RBP17.41■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Zbtb3Q91X45 518 aa17.41■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Kcnq5Q9JK45 933 aa17.41■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Sart3Q9JLI8 962 aaKnown RBP17.41■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Sytl4Q9R0Q1 673 aa17.41■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Eddm13E9Q7F5 164 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Mmp8O70138 465 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Rhbdl3P58873 404 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Rbm33Q9CXK9 1231 aaKnown RBP17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Fbxo3Q9DC63 480 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Carmil3Q3UFQ8 1375 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Zfp646Q6NV66 1788 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 AaasP58742 546 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Lrch1P62046 709 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Psmd1Q3TXS7 953 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 1700123L14RikQ3V2K7 440 aa17.4■□□□□ 0.38
Ccdc171-204ENSMUST00000126429 Foxd1Q61345 456 aa17.39■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 CbarpQ66L44 698 aa17.39■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Dcdc2bF7BCK0 340 aa17.38■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Timm10P62073 90 aa17.38■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Nlrp1aQ2LKU9 1182 aa17.38■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Ddx46Q569Z5 1032 aaKnown RBP17.38■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Ppp4r3aQ6P2K6 820 aa17.38■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Nphp1Q9QY53 687 aa17.38■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Thsd7bQ6P4U0 1607 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 EvplQ9D952 2035 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Glt1d1A4FUP9 346 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Csrnp1P59054 583 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Map9Q3TRR0 646 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Fchsd1Q6PFY1 688 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 WdpcpQ8C456 722 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 4930504O13RikQ8C5Z9 145 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Mrpl12Q9DB15 201 aaKnown RBP17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 ParvgQ9ERD8 331 aa17.37■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Abcc4E9Q236 1325 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Scn9aQ62205 1984 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Mcmdc2E9Q956 681 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Usp17lbE9Q9U0 468 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Gm4340L7N2C4 268 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Atp2b3Q0VF55 1220 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 NfkbibQ60778 359 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Trim27Q62158 513 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Fstl1Q62356 306 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Fam102bQ8BQS4 339 aa17.36■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Speer4dL7N216 212 aa17.35■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Magea8O89012 320 aa17.35■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Sept1P42209 366 aa17.35■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Neurod6P48986 337 aa17.35■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Nlgn2Q69ZK9 836 aa17.35■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Pdzrn3Q69ZS0 1063 aa17.35■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Glis2Q8VDL9 521 aa17.35■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Nphp3Q7TNH6 1325 aa17.35■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Phrf1A6H619 1682 aa17.34■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Eif6O55135 245 aa17.34■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Sptlc3Q8BG54 563 aa17.34■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Ufl1Q8CCJ3 793 aaKnown RBP17.34■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Ccne2Q9Z238 404 aa17.34■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Rlbp1Q9Z275 317 aa17.34■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Mtmr2Q9Z2D1 643 aa17.34■□□□□ 0.37
Ccdc171-204ENSMUST00000126429 Ankrd63A2ARS0 390 aa17.33■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms