RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Magea5O89009 320 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 En2P09066 324 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Timp2P25785 220 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Nkpd1Q0VF94 599 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Puf60Q3UEB3 564 aaKnown RBP9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Mrs2Q5NCE8 434 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 SkiQ60698 725 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Prmt3Q922H1 532 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Gmpr2Q99L27 348 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 CsadQ9DBE0 493 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Magea2Q9R2A2 320 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Hdac6Q9Z2V5 1149 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Tet3Q8BG87 1668 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Plekhg1F6S200 1446 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Bcl9lQ67FY2 1494 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Slc39a2G3X943 309 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Rundc1Q0VDN7 615 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Ccdc129Q14B48 1034 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Kmt5bQ3U8K7 883 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Fam198aQ3UY90 562 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Kiaa1211Q5PR69 1207 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Ezh2Q61188 746 aaKnown RBP9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Gjd4Q8BSD4 364 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Dpp9Q8BVG4 862 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Frmd6Q8C0V9 622 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Ddx27Q921N6 760 aaKnown RBP9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Clp1Q99LI9 425 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 RfxankQ9Z205 269 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Mdc1Q5PSV9 1707 aa9.48□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Dpysl4O35098 572 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 WasP70315 520 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Sh3bp2Q06649 559 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Phactr1Q2M3X8 580 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 CblbQ3TTA7 982 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Nxpe4Q52KP5 543 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Prpf38bQ80SY5 542 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Card11Q8CIS0 1159 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Rnf219Q8K2Y0 722 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Pcdhb13Q91Y06 796 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Wdr17E9Q271 1322 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Sos2Q02384 1333 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Kat6bQ8BRB7 1872 aa9.47□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Abca14E9Q8F8 1683 aa9.46□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Srsf11E9Q6E5 511 aaKnown RBP9.46□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Gja8P28236 440 aa9.46□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Idi1P58044 227 aa9.46□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Wwc2Q6NXJ0 1187 aa9.46□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Exoc6Q8R313 802 aa9.46□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Upk3bl1Q9D701 249 aa9.46□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Rab3gap2Q8BMG7 1366 aa9.46□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Zmym3Q9JLM4 1370 aa9.46□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Nme2Q01768 152 aa9.45□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Fbxl21Q8BFZ4 434 aa9.45□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Ptk7Q8BKG3 1062 aa9.45□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Taok3Q8BYC6 898 aa9.45□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Dtwd2Q9D0U1 298 aa9.45□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Tjap1Q9DCD5 539 aa9.45□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Prss30Q9QYZ9 310 aa9.45□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 CorinQ9Z319 1113 aa9.45□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 UprtB1AVZ0 310 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 HmgcrQ01237 887 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Ppp1r12cQ3UMT1 782 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Tbc1d9Q3UYK3 1264 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Tmem40Q4FJU9 225 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Utp14aQ640M1 767 aaKnown RBP9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Pcdhga7Q6DD96 935 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Serinc5Q8BHJ6 461 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Chmp7Q8R1T1 451 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Trim33Q99PP7 1142 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Ccer1Q9CQL2 403 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Txnrd1Q9JMH6 613 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Trip4Q9QXN3 581 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Ncapd2Q8K2Z4 1392 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Mug2P28666 1451 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Nwd2Q6P5U7 1742 aa9.44□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Dot1lQ6XZL8 1540 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Gm38655A0A286YDK6 273 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Impdh2P24547 514 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 SnrpbP27048 231 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 VdrP48281 422 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Kcnj4P52189 445 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 EgfrQ01279 1210 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Rgl3Q3UYI5 709 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Gpr150Q8BL07 427 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Pdcd2lQ8C5N5 364 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Traf3ip2Q8N7N6 555 aa9.43□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Mon2Q80TL7 1715 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Tulp4Q9JIL5 1547 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 RalgapbQ8BQZ4 1484 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Astn2Q80Z10 1352 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Dcaf10A2AKB9 566 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Nrsn1P97799 196 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 RubcnlQ3TD16 648 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Ccdc85aQ5SP85 500 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Fam196bQ6GQV1 535 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 DiexfQ8BTT6 772 aaKnown RBP9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Snx11Q91WL6 271 aa9.42□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Upf2A2AT37 1269 aaKnown RBP9.41□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Lrfn1Q2WF71 766 aa9.41□□□□□ -0.9
Ccdc47-202ENSMUST00000106865 Wdr43Q6ZQL4 677 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms