Protein–RNA interactions for Protein: Q8N7N6

Traf3ip2, TRAF3-interacting protein 2, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3ip2Q8N7N6 Gm25239-201ENSMUST00000174915 86 ntBASIC39.94■■■■□ 3.98
Traf3ip2Q8N7N6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Traf3ip2Q8N7N6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Traf3ip2Q8N7N6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Traf3ip2Q8N7N6 Gm15042-201ENSMUST00000120212 883 ntBASIC35.04■■■■□ 3.2
Traf3ip2Q8N7N6 Gm24109-201ENSMUST00000175489 103 ntBASIC34.54■■■■□ 3.12
Traf3ip2Q8N7N6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Traf3ip2Q8N7N6 Gm15045-201ENSMUST00000117359 883 ntBASIC34.28■■■■□ 3.08
Traf3ip2Q8N7N6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Traf3ip2Q8N7N6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.96■■■■□ 3.03
Traf3ip2Q8N7N6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Traf3ip2Q8N7N6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Traf3ip2Q8N7N6 Gm23366-201ENSMUST00000175022 89 ntBASIC33.41■■■□□ 2.94
Traf3ip2Q8N7N6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Traf3ip2Q8N7N6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Traf3ip2Q8N7N6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Traf3ip2Q8N7N6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.63■■■□□ 2.81
Traf3ip2Q8N7N6 Psd-208ENSMUST00000224556 2034 ntBASIC32.48■■■□□ 2.79
Traf3ip2Q8N7N6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Traf3ip2Q8N7N6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
Traf3ip2Q8N7N6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Traf3ip2Q8N7N6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Traf3ip2Q8N7N6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Traf3ip2Q8N7N6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.12■■■□□ 2.73
Traf3ip2Q8N7N6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Traf3ip2Q8N7N6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Traf3ip2Q8N7N6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
Traf3ip2Q8N7N6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.96■■■□□ 2.71
Traf3ip2Q8N7N6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.94■■■□□ 2.7
Traf3ip2Q8N7N6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.79■■■□□ 2.68
Traf3ip2Q8N7N6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Traf3ip2Q8N7N6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Traf3ip2Q8N7N6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Traf3ip2Q8N7N6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Traf3ip2Q8N7N6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.5■■■□□ 2.63
Traf3ip2Q8N7N6 Gm25238-201ENSMUST00000174914 89 ntBASIC31.48■■■□□ 2.63
Traf3ip2Q8N7N6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Traf3ip2Q8N7N6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.41■■■□□ 2.62
Traf3ip2Q8N7N6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Traf3ip2Q8N7N6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Traf3ip2Q8N7N6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Traf3ip2Q8N7N6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Traf3ip2Q8N7N6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Traf3ip2Q8N7N6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
Traf3ip2Q8N7N6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.88■■■□□ 2.53
Traf3ip2Q8N7N6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.84■■■□□ 2.53
Traf3ip2Q8N7N6 Gm27325-201ENSMUST00000175467 74 ntBASIC30.76■■■□□ 2.51
Traf3ip2Q8N7N6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Traf3ip2Q8N7N6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Traf3ip2Q8N7N6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Traf3ip2Q8N7N6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Traf3ip2Q8N7N6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.63■■■□□ 2.49
Traf3ip2Q8N7N6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Traf3ip2Q8N7N6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
Traf3ip2Q8N7N6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.5■■■□□ 2.47
Traf3ip2Q8N7N6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Traf3ip2Q8N7N6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.46■■■□□ 2.47
Traf3ip2Q8N7N6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Traf3ip2Q8N7N6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.37■■■□□ 2.45
Traf3ip2Q8N7N6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Traf3ip2Q8N7N6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Traf3ip2Q8N7N6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Traf3ip2Q8N7N6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Traf3ip2Q8N7N6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.17■■■□□ 2.42
Traf3ip2Q8N7N6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Traf3ip2Q8N7N6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Traf3ip2Q8N7N6 Gm25262-201ENSMUST00000174934 133 ntBASIC30.13■■■□□ 2.41
Traf3ip2Q8N7N6 Rab21-202ENSMUST00000218831 843 ntBASIC30.12■■■□□ 2.41
Traf3ip2Q8N7N6 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.12■■■□□ 2.41
Traf3ip2Q8N7N6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Traf3ip2Q8N7N6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Traf3ip2Q8N7N6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Traf3ip2Q8N7N6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Traf3ip2Q8N7N6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Traf3ip2Q8N7N6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30■■■□□ 2.39
Traf3ip2Q8N7N6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Traf3ip2Q8N7N6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.91■■■□□ 2.38
Traf3ip2Q8N7N6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Traf3ip2Q8N7N6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Traf3ip2Q8N7N6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Traf3ip2Q8N7N6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Traf3ip2Q8N7N6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.69■■■□□ 2.34
Traf3ip2Q8N7N6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.69■■■□□ 2.34
Traf3ip2Q8N7N6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Traf3ip2Q8N7N6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Traf3ip2Q8N7N6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Traf3ip2Q8N7N6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.62■■■□□ 2.33
Traf3ip2Q8N7N6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Traf3ip2Q8N7N6 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.6■■■□□ 2.33
Traf3ip2Q8N7N6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.53■■■□□ 2.32
Traf3ip2Q8N7N6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Traf3ip2Q8N7N6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Traf3ip2Q8N7N6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.48■■■□□ 2.31
Traf3ip2Q8N7N6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Traf3ip2Q8N7N6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Traf3ip2Q8N7N6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Traf3ip2Q8N7N6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Traf3ip2Q8N7N6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Traf3ip2Q8N7N6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Traf3ip2Q8N7N6 Gm26115-201ENSMUST00000175605 87 ntBASIC29.32■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms