Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm25239-201ENSMUST00000174915 86 ntBASIC34.48■■■■□ 3.11
Pcdhga7Q6DD96 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Pcdhga7Q6DD96 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Pcdhga7Q6DD96 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Pcdhga7Q6DD96 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Pcdhga7Q6DD96 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pcdhga7Q6DD96 Psd-208ENSMUST00000224556 2034 ntBASIC31.02■■■□□ 2.56
Pcdhga7Q6DD96 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pcdhga7Q6DD96 Gm15042-201ENSMUST00000120212 883 ntBASIC30.78■■■□□ 2.52
Pcdhga7Q6DD96 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pcdhga7Q6DD96 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pcdhga7Q6DD96 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcdhga7Q6DD96 Gm15045-201ENSMUST00000117359 883 ntBASIC30.24■■■□□ 2.43
Pcdhga7Q6DD96 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pcdhga7Q6DD96 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.04■■■□□ 2.4
Pcdhga7Q6DD96 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pcdhga7Q6DD96 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pcdhga7Q6DD96 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pcdhga7Q6DD96 Gm24109-201ENSMUST00000175489 103 ntBASIC29.6■■■□□ 2.33
Pcdhga7Q6DD96 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pcdhga7Q6DD96 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Pcdhga7Q6DD96 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pcdhga7Q6DD96 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pcdhga7Q6DD96 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pcdhga7Q6DD96 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pcdhga7Q6DD96 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pcdhga7Q6DD96 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.2■■■□□ 2.26
Pcdhga7Q6DD96 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhga7Q6DD96 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pcdhga7Q6DD96 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.94■■■□□ 2.22
Pcdhga7Q6DD96 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdhga7Q6DD96 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pcdhga7Q6DD96 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhga7Q6DD96 Gm23366-201ENSMUST00000175022 89 ntBASIC28.86■■■□□ 2.21
Pcdhga7Q6DD96 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pcdhga7Q6DD96 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhga7Q6DD96 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhga7Q6DD96 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhga7Q6DD96 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdhga7Q6DD96 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdhga7Q6DD96 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.46■■■□□ 2.15
Pcdhga7Q6DD96 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.41■■■□□ 2.14
Pcdhga7Q6DD96 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Pcdhga7Q6DD96 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Pcdhga7Q6DD96 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.31■■■□□ 2.12
Pcdhga7Q6DD96 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.29■■■□□ 2.12
Pcdhga7Q6DD96 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pcdhga7Q6DD96 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Pcdhga7Q6DD96 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pcdhga7Q6DD96 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Pcdhga7Q6DD96 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhga7Q6DD96 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pcdhga7Q6DD96 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Pcdhga7Q6DD96 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdhga7Q6DD96 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdhga7Q6DD96 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.72■■■□□ 2.03
Pcdhga7Q6DD96 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pcdhga7Q6DD96 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhga7Q6DD96 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.63■■■□□ 2.01
Pcdhga7Q6DD96 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdhga7Q6DD96 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhga7Q6DD96 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Pcdhga7Q6DD96 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.51■■■□□ 2
Pcdhga7Q6DD96 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhga7Q6DD96 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhga7Q6DD96 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhga7Q6DD96 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Pcdhga7Q6DD96 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
Pcdhga7Q6DD96 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Pcdhga7Q6DD96 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Pcdhga7Q6DD96 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.32■■□□□ 1.96
Pcdhga7Q6DD96 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdhga7Q6DD96 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Pcdhga7Q6DD96 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pcdhga7Q6DD96 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdhga7Q6DD96 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdhga7Q6DD96 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhga7Q6DD96 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.18■■□□□ 1.94
Pcdhga7Q6DD96 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdhga7Q6DD96 Gm27325-201ENSMUST00000175467 74 ntBASIC27.12■■□□□ 1.93
Pcdhga7Q6DD96 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhga7Q6DD96 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdhga7Q6DD96 Gm25238-201ENSMUST00000174914 89 ntBASIC27.02■■□□□ 1.92
Pcdhga7Q6DD96 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdhga7Q6DD96 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdhga7Q6DD96 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.88■■□□□ 1.89
Pcdhga7Q6DD96 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.86■■□□□ 1.89
Pcdhga7Q6DD96 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdhga7Q6DD96 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhga7Q6DD96 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhga7Q6DD96 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhga7Q6DD96 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdhga7Q6DD96 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.79■■□□□ 1.88
Pcdhga7Q6DD96 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdhga7Q6DD96 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Pcdhga7Q6DD96 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhga7Q6DD96 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Pcdhga7Q6DD96 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhga7Q6DD96 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhga7Q6DD96 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms