RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Rsph1Q8VIG3 301 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Erc1Q99MI1 1120 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 CenppQ9CZ92 286 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Pde8aO88502 823 aa10.77□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Hoxc10P31257 342 aa10.77□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Mapk1P63085 358 aa10.77□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Prdm4Q80V63 803 aa10.77□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Matr3Q8K310 846 aaKnown RBP10.77□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Talpid3E9PV87 1520 aa10.77□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Fhod3Q76LL6 1578 aa10.77□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Myom2Q14BI5 1463 aa10.77□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Stag2O35638 1231 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Trim43cP86449 446 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Nkain3Q3URJ8 181 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Nfe2l1Q61985 741 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Q8BTG6 205 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Pex19Q8VCI5 299 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Agap3Q8VHH5 910 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Cep83Q9D5R3 692 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 NgdnQ9DB96 315 aaKnown RBP10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Hip1rQ9JKY5 1068 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Trim44Q9QXA7 346 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 3425401B19RikD3Z1D3 1412 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm6370A0A0G2JGX9 315 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gm6309L7N481 315 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Hcls1P49710 486 aaKnown RBP10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ticam2Q8BJQ4 232 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Fam163bQ8BUM6 167 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Tgm5Q9D7I9 724 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Jph3Q9ET77 744 aa10.76□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Mtus2Q3UHD3 1353 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Tcp10bE9PYJ0 438 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Sept7O55131 436 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gja8P28236 440 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Rack1P68040 317 aaKnown RBP10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Nfe2Q07279 373 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Map3k12Q60700 888 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Dhx37Q6NZL1 1150 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Zfpm2Q8CCH7 1151 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Phc3Q8CHP6 981 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 CopaQ8CIE6 1224 aaKnown RBP10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Unc5dQ8K1S2 956 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Cabp1Q9JLK7 227 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Atp1a4Q9WV27 1032 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Supt6hQ62383 1726 aaKnown RBP10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Trpm1Q2TV84 1622 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Gli2Q0VGT2 1544 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Smad7O35253 426 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Crtc2Q3U182 692 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Kif3bQ61771 747 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 N6amt1Q6SKR2 214 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Cnpy4Q8BQ47 245 aa10.75□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Abca6Q8K441 1624 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 FanciQ8K368 1330 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Neu1O35657 409 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ica1lQ3TY65 431 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ppp2r5aQ6PD03 486 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Spag5Q7TME2 1165 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Sh3bgrl2Q8BG73 107 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ccdc187Q8C5V8 958 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ano2Q8CFW1 1002 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Mrpl58Q8R035 206 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Trim7Q923T7 510 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Rgs3Q9DC04 966 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 IncenpQ9WU62 880 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Znf518aB2RRF6 1478 aaKnown RBP10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Arhgef10lA2AWP8 1280 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Bin1O08539 588 aaKnown RBP10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Phka1P18826 1241 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Impdh2P24547 514 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Rnf40Q3U319 1001 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ankrd40Q5SUE8 363 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Snx32Q80ZJ7 404 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Cc2d1bQ8BRN9 848 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Abcg4Q91WA9 646 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Thumpd2Q9CZB3 528 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ccdc70Q9D9B0 223 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Xpo7Q9EPK7 1087 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 SphkapQ6NSW3 1687 aa10.74□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Mast1Q9R1L5 1570 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Nrg2P56974 756 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Tmem164Q6PHN7 296 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Tspyl2Q7TQI8 677 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Rfc4Q99J62 364 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Grk2Q99MK8 689 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Vstm5Q9D806 199 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 IdeQ9JHR7 1019 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Pold1P52431 1105 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Lrrfip1Q3UZ39 729 aaKnown RBP10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ankrd13dQ6PD24 605 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ttc7aQ8BGB2 858 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Zkscan8Q8BSL0 588 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ipo7Q9EPL8 1038 aaKnown RBP10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Sfmbt1Q9JMD1 863 aa10.73□□□□□ -0.69
Upf3b-201ENSMUST00000076265 4930407I10RikD3Z5T8 1512 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Plekhh2Q8C115 1491 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Ca8P28651 291 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Alox12eP55249 662 aa10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Larp7Q05CL8 570 aaKnown RBP10.72□□□□□ -0.69
Upf3b-201ENSMUST00000076265 Phactr1Q2M3X8 580 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 92.6 ms