RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Ccdc158Q8CDI6 1109 aa23.32■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Prl7a2O54831 253 aa23.32■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Limch1Q3UH68 1057 aa23.32■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Asap2Q7SIG6 958 aa23.32■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Golim4Q8BXA1 655 aa23.32■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Iffo2Q8R2V2 512 aa23.32■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Fam213aQ9CYH2 218 aa23.32■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Gm21680A0A0G2JGR8 267 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Pdia4P08003 638 aaKnown RBP23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Exosc10P56960 887 aaKnown RBP23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Csrnp1P59054 583 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 CgnP59242 1191 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 BrapQ99MP8 591 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Mmel1Q9JLI3 765 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Timm10P62073 90 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Zfp317Q8C0Q5 607 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Plcd3Q8K2J0 785 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Mylk2Q8VCR8 613 aa23.31■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Tyro3P55144 880 aa23.3■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Pus3Q9JI38 481 aa23.3■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Cspp1B2RX88 1205 aa23.29■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Gm21985Q6P6P5 1106 aa23.29■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Oxsr1Q6P9R2 527 aa23.29■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 TnmdQ9EP64 317 aa23.29■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Txnrd1Q9JMH6 613 aa23.29■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Znf692Q3U381 531 aa23.29■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Ubash3aQ3V3E1 624 aa23.29■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 1700113H08RikE9Q9Q5 327 aa23.28■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Tpm3P21107 285 aaKnown RBP23.28■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Hspd1P63038 573 aaKnown RBP23.28■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Atad2Q8CDM1 1040 aa23.28■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Trim59Q922Y2 403 aa23.28■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Cdhr2E9Q7P9 1308 aa23.27■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Mtmr3Q8K296 1196 aa23.27■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Mrpl44Q9CY73 333 aaKnown RBP23.27■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Usp42B2RQC2 1324 aaKnown RBP23.27■■□□□ 1.32
Ccdc34-201ENSMUST00000028580 Slc4a1P04919 929 aa23.26■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Tmem109Q3UBX0 243 aa23.26■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Ppp4r3bQ922R5 820 aa23.26■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Ncaph2Q8BSP2 607 aa23.26■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Rassf8Q8CJ96 419 aa23.26■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Sh3bp5Q9Z131 463 aa23.26■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Brpf3B2KF05 1204 aaKnown RBP23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Cfap58B2RW38 873 aa23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Hmx1O70218 332 aa23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Lnx1O70263 728 aa23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Gm12185Q5NCB2 835 aa23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Chmp3Q9CQ10 224 aa23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Nfe2l3Q9WTM4 660 aa23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Kdm3aQ6PCM1 1323 aa23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 PappaQ8R4K8 1624 aa23.25■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Rab3gap1Q80UJ7 981 aa23.24■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 DmtnQ9WV69 405 aa23.24■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Sipa1l3G3X9J0 1776 aa23.24■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 AidaQ8C4Q6 305 aa23.24■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Crb1Q8VHS2 1405 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Wdr78E9PYY5 807 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Usp28Q5I043 1051 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Lmbrd2Q8C561 694 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Inpp5bQ8K337 993 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Hmgn5Q9JL35 406 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Ubn2Q80WC1 1314 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Shank3Q4ACU6 1730 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Nucb2P81117 420 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Bicd2Q921C5 820 aa23.23■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Mctp1E9PV86 951 aa23.22■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Rgs9O54828 675 aa23.22■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Ncbp1Q3UYV9 790 aaKnown RBP23.22■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Rbm17Q8JZX4 405 aaKnown RBP23.22■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Rufy2Q8R4C2 606 aa23.22■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Carmil3Q3UFQ8 1375 aa23.22■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Kif3aP28741 701 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Kcnf1Q7TSH7 493 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Cdca8Q8BHX3 289 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Rps6ka5Q8C050 863 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Nop14Q8R3N1 860 aaKnown RBP23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Wdr19Q3UGF1 1341 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 TnksQ6PFX9 1320 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Cyp3a57D3YYZ0 503 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Ankib1Q6ZPS6 1085 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Pms1Q8K119 917 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Rbm10Q99KG3 930 aaKnown RBP23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Sh3bgrQ9WUZ7 214 aa23.21■■□□□ 1.31
Ccdc34-201ENSMUST00000028580 Osbpl5Q9ER64 874 aa23.2■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Aox4Q3TYQ9 1336 aa23.2■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Cyp2d34L7N463 504 aa23.2■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Gnl3lQ6PGG6 577 aaKnown RBP23.2■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Ttc19Q8CC21 365 aa23.2■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Ccdc112A0AUP1 442 aa23.19■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Hap1O35668 628 aa23.19■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Plcb3P51432 1234 aaKnown RBP23.19■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Nxf7Q80SZ6 620 aaKnown RBP23.19■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 TsksO54887 585 aa23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Bach1P97302 739 aa23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Trim56Q80VI1 734 aaKnown RBP23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Acsbg1Q99PU5 721 aa23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Pard3Q99NH2 1333 aa23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Cyb5rlB1AS42 316 aa23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Atp8a2P98200 1148 aa23.18■■□□□ 1.3
Ccdc34-201ENSMUST00000028580 Clca2Q8BG22 942 aa23.18■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms