RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Ppfia1B2RXQ2 1266 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Als2cr12Q8BVM7 383 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Bmp2kQ91Z96 1138 aa5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Nop2Q922K7 793 aaKnown RBP5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Mad1l1Q9WTX8 717 aaKnown RBP5.21□□□□□ -1.58
Prkdc-201ENSMUST00000023352 1700017N19RikA0A087WPJ1 469 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Znf526Q8BI66 675 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Taok3Q8BYC6 898 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 4930548H24RikQ9D496 437 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Slc12a5Q91V14 1138 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ebag9Q9D0V7 213 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Nol7Q9D7Z3 254 aaKnown RBP5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rasa1E9PYG6 1038 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Trim11Q99PQ2 467 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ptpn23Q6PB44 1692 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 PtprtQ99M80 1454 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Mctp1E9PV86 951 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Hmox1P14901 289 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cwc27Q3TKY6 469 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Mphosph10Q810V0 681 aaKnown RBP5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rai14Q9EP71 979 aaKnown RBP5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 SyncQ9EPM5 470 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cgref1Q8R1U2 281 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Mmp8O70138 465 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cnnm2Q3TWN3 875 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tsg101Q61187 391 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 AidaQ8C4Q6 305 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Pym1Q8CHP5 203 aaKnown RBP5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cabp2Q9JLK4 216 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Zscan20B2KFW1 1030 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Maml3D4QGC2 1135 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Limch1Q3UH68 1057 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Pla2g4eQ50L42 875 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Zpr1Q62384 459 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Larp1Q6ZQ58 1072 aaKnown RBP5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ppp1r42Q8R1Z4 357 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Sall3Q62255 1320 aa5.2□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Vamp4O70480 141 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Sh3bp1P55194 680 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Usp25P57080 1055 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tspyl3Q3UYP3 334 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gnat3Q3V3I2 354 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cage1Q5IR70 849 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 B4galnt4Q766D5 1034 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Sdccag8Q80UF4 717 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Micall1Q8BGT6 870 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gle1Q8R322 699 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Kcnn1Q9EQR3 537 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Fndc1E9Q043 1732 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc170D3YXL0 722 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Psmd1Q3TXS7 953 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Sh3gl3Q62421 347 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Clip2Q9Z0H8 1047 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Slc7a3P70423 618 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cracr2aQ3UP38 310 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 L1td1Q587J6 782 aaKnown RBP5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc148Q6P5U8 527 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rapgef3Q8VCC8 918 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tpcn1Q9EQJ0 817 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tagap1P0CAX8 505 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 LyarQ08288 388 aaKnown RBP5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Fgfr1opQ66JX5 399 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cc2d1aQ8K1A6 943 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Hnrnpul1Q8VDM6 859 aaKnown RBP5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cnnm3Q32NY4 713 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Usp48Q3V0C5 1052 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 HellsQ60848 821 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Lamb3Q61087 1168 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gnl2Q99LH1 728 aaKnown RBP5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Map3k19E9Q3S4 1311 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Myo1aO88329 1043 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ptgs1P22437 602 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Kif5bQ61768 963 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tmem119Q8R138 280 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rab3il1Q8VDV3 383 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Anapc4Q91W96 807 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Dtnbp1Q91WZ8 352 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Taf7Q9R1C0 341 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cep85lA0A1W2P884 806 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Slc13a4Q8BZ82 625 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 RpainQ9CWY9 219 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc70Q9D9B0 223 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Sel1lQ9Z2G6 790 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Camk4P08414 469 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gnat2P50149 354 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rimbp2Q80U40 1072 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Fam160b2Q80YR2 744 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Prc1Q99K43 603 aaKnown RBP5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Riok3Q9DBU3 519 aaKnown RBP5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 AatfQ9JKX4 526 aaKnown RBP5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Mcmdc2E9Q956 681 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Map2k1P31938 393 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Utp18Q5SSI6 552 aaKnown RBP5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 LnpkQ7TQ95 425 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 SncbQ91ZZ3 133 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Atxn3Q9CVD2 355 aa5.19□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Chl1P70232 1209 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Wdr93Q402B2 695 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ginm1Q91WR6 327 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Trim34aQ99PP6 485 aa5.18□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms