RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 IFNA2P01563 188 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 MT-ND5P03915 603 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 TNFRSF1BP20333 461 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 PCSK6P29122 969 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 THBS4P35443 961 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 AQP2P41181 271 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 RAD52P43351 418 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 PSME3P61289 254 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 RPL27P61353 136 aaKnown RBP14.47□□□□□ -0.09
USB1-211ENST00000565662 PCBD1P61457 104 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 HGFACQ04756 655 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 PRKCDQ05655 676 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 CD47Q08722 323 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 SF3A3Q12874 501 aaKnown RBP eCLIP14.47□□□□□ -0.09
USB1-211ENST00000565662 KRT72Q14CN4 511 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 TMEM249Q2WGJ8 235 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 FAM209AQ5JX71 171 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 LRFN4Q6PJG9 635 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 MBOAT2Q6ZWT7 520 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 RBM15BQ8NDT2 890 aaKnown RBP14.47□□□□□ -0.09
USB1-211ENST00000565662 SLC30A7Q8NEW0 376 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 HSH2DQ96JZ2 352 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 ZNF75AQ96N20 296 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 SORCS2Q96PQ0 1159 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 CCNB1IP1Q9NPC3 277 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 C20orf141Q9NUB4 165 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 CDC42EP3Q9UKI2 254 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 ENPP4Q9Y6X5 453 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 TLN2Q9Y4G6 2542 aa14.47□□□□□ -0.09
USB1-211ENST00000565662 A0A1W2PRQ8 180 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 A8MV72 311 aaPredicted RBP14.46□□□□□ -0.09
USB1-211ENST00000565662 EFCAB9A8MZ26 197 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 INAFM1C9JVW0 142 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 CRLF1O75462 422 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 F13BP05160 661 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 CELA3BP08861 270 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 RHCEP18577 417 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 APLNRP35414 380 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 HSF2Q03933 536 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 DGCR6Q14129 220 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 SAMD4BQ5PRF9 694 aaKnown RBP14.46□□□□□ -0.09
USB1-211ENST00000565662 ARMC4Q5T2S8 1044 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 KRT80Q6KB66 452 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 ALDH16A1Q8IZ83 802 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 OR4K5Q8NGD3 323 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 SNX33Q8WV41 574 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 KCNK17Q96T54 332 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 DOK1Q99704 481 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 SLCO1C1Q9NYB5 712 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 ZNF224Q9NZL3 707 aa14.46□□□□□ -0.09
USB1-211ENST00000565662 CHD3Q12873 2000 aaKnown RBP14.46□□□□□ -0.1
USB1-211ENST00000565662 CSPG4Q6UVK1 2322 aa14.46□□□□□ -0.1
USB1-211ENST00000565662 ZNF503-AS2A6NEH8 195 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 H3BSA7 217 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 XKRYO14609 159 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 SHOX2O60902 331 aaPredicted RBP14.45□□□□□ -0.1
USB1-211ENST00000565662 MRPS11P82912 194 aaKnown RBP14.45□□□□□ -0.1
USB1-211ENST00000565662 LSM11P83369 360 aaKnown RBP eCLIP14.45□□□□□ -0.11e-9■■■■■ 34.8
USB1-211ENST00000565662 PIGFQ07326 219 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 FXNQ16595 210 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 CYB5R2Q6BCY4 276 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 RGS7BPQ6MZT1 257 aaPredicted RBP14.45□□□□□ -0.1
USB1-211ENST00000565662 ARL9Q6T311 187 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 TMPRSS11FQ6ZWK6 438 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 VTCN1Q7Z7D3 282 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 SYT9Q86SS6 491 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 ALPK2Q86TB3 2170 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 SKA3Q8IX90 412 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 NRMQ8IXM6 262 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 PGAM4Q8N0Y7 254 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 LRRC37BQ96QE4 947 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 ZNF347Q96SE7 839 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 GORASP2Q9H8Y8 452 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 CGGBP1Q9UFW8 167 aaPredicted RBP14.45□□□□□ -0.1
USB1-211ENST00000565662 ARL2BPQ9Y2Y0 163 aa14.45□□□□□ -0.1
USB1-211ENST00000565662 A0A096LNT2 108 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 H1F0P07305 194 aaKnown RBP14.44□□□□□ -0.1
USB1-211ENST00000565662 HSD17B1P14061 328 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 TUBG1P23258 451 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 GIFP27352 417 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 NR4A2P43354 598 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 CTXN1P60606 82 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 KRTAP1-1Q07627 177 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 RAB39AQ14964 217 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 C6orf52Q5T4I8 152 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 GPR139Q6DWJ6 353 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 C16orf89Q6UX73 402 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 MYPOPQ86VE0 399 aaPredicted RBP14.44□□□□□ -0.1
USB1-211ENST00000565662 TREML1Q86YW5 311 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 SVOPLQ8N434 492 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 MCUR1Q96AQ8 359 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 FAM107BQ9H098 131 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 SEC61A2Q9H9S3 476 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 TUBG2Q9NRH3 451 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 DCAF13Q9NV06 445 aaKnown RBP14.44□□□□□ -0.1
USB1-211ENST00000565662 ADA2Q9NZK5 511 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 EIF3KQ9UBQ5 218 aaKnown RBP14.44□□□□□ -0.1
USB1-211ENST00000565662 GRHPRQ9UBQ7 328 aa14.44□□□□□ -0.1
USB1-211ENST00000565662 FN1P02751 2386 aaKnown RBP14.44□□□□□ -0.1
USB1-211ENST00000565662 ABCA1O95477 2261 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms