RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 CDX2Q99626 313 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 ZNF649Q9BS31 505 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 TMEM43Q9BTV4 400 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 DPH1Q9BZG8 443 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 NUAK2Q9H093 628 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 SP140LQ9H930 580 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 TBC1D17Q9HA65 648 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 ZNF304Q9HCX3 659 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 MKKSQ9NPJ1 570 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 MEPEQ9NQ76 525 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 HINT3Q9NQE9 182 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 C20orf141Q9NUB4 165 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 IRAK4Q9NWZ3 460 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 TXNL4BQ9NX01 149 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 TAS2R16Q9NYV7 291 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 FLRT3Q9NZU0 649 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 RPS6KB2Q9UBS0 482 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 KLHL21Q9UJP4 597 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 SIGLEC7Q9Y286 467 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 TRAPPC4Q9Y296 219 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 DTX4Q9Y2E6 619 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 GSTK1Q9Y2Q3 226 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 GPR52Q9Y2T5 361 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 CAB39Q9Y376 341 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 TMEM184BQ9Y519 407 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 RALGAPA1Q6GYQ0 2036 aa3.95□□□□□ -1.78
UBE2D3-230ENST00000510599 CACNA1EQ15878 2313 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 IGLV3-12A0A075B6K2 115 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 A0A1B0GTQ1 180 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 A0A1B0GX78 115 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 RIIAD1A6NNX1 92 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 ARPC3O15145 178 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 ZNF264O43296 627 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 EIF4E2O60573 245 aaKnown RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 TSPAN2O60636 221 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PFDN1O60925 122 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SDC3O75056 442 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 CDC123O75794 336 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 UPK1BO75841 260 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 OR7A10O76100 309 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 NDUFB2O95178 105 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 DDAH2O95865 285 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 CH25HO95992 272 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 CSTAP01040 98 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 HLA-DPB1P04440 258 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 CYC1P08574 325 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SAGP10523 405 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 FOSL2P15408 326 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 ZNF3P17036 446 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SLC2A5P22732 501 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PTBP1P26599 531 aaKnown RBP eCLIP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 UQCRC1P31930 480 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 ATP6V1E1P36543 226 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SOX3P41225 446 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PPM1FP49593 454 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PGDP52209 483 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PNLIPRP2P54317 469 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 TIRAPP58753 221 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PRPS1P60891 318 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 IFITM3Q01628 133 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 ACY1Q03154 408 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 HSF2Q03933 536 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 RUNX1T1Q06455 604 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 CDC20Q12834 499 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 KRR1Q13601 381 aaKnown RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 GGTLC2Q14390 218 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SOWAHCQ53LP3 525 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SLC35D3Q5M8T2 416 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SPANXN2Q5MJ10 180 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 LIPKQ5VXJ0 399 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 NKAIN2Q5VXU1 208 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 WBP2NLQ6ICG8 309 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PLBD1Q6P4A8 553 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PAQR6Q6TCH4 344 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 ZNF322Q6U7Q0 402 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 HSDL2Q6YN16 418 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 DPY19L2P2Q6ZN68 376 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 RABEPKQ7Z6M1 372 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 OAFQ86UD1 273 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 CCDC190Q86UF4 302 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 LHFPL3Q86UP9 236 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 WDR5BQ86VZ2 330 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 MEX3DQ86XN8 651 aaKnown RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PARP16Q8N5Y8 322 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 ACBD7Q8N6N7 88 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SLC37A3Q8NCC5 494 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 OR1N1Q8NGS0 311 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 OR13C2Q8NGS9 318 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 OR4C3Q8NH37 302 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 OR1L3Q8NH93 324 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 TM9SF4Q92544 642 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 AP3S1Q92572 193 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 PTP4A1Q93096 173 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SLC25A46Q96AG3 418 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 C3orf49Q96BT1 292 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SGTBQ96EQ0 304 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 KCTD7Q96MP8 289 aa3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 GPX7Q96SL4 187 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 SECISBP2Q96T21 854 aaKnown RBP3.94□□□□□ -1.78
UBE2D3-230ENST00000510599 TEAD3Q99594 435 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms