RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 SH3GL1Q99961 368 aa17■□□□□ 0.31
CCHCR1-230ENST00000513222 CBLN4Q9NTU7 201 aa17■□□□□ 0.31
CCHCR1-230ENST00000513222 A0A1W2PR80 420 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 BBIP1A8MTZ0 92 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 SLC22A2O15244 555 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 CHP2O43745 196 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 MT-ATP6P00846 226 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 IGLV1-44P01699 117 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 TROVE2P10155 538 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 NCALDP61601 193 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 SPOCK1Q08629 439 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 VEZF1Q14119 521 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 TBRG1Q3YBR2 411 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 C9orf135Q5VTT2 229 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 NIPAL3Q6P499 406 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 ANKRD16Q6P6B7 361 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 B3GLCTQ6Y288 498 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 ZNF627Q7L945 461 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 DEPDC4Q8N2C3 294 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 SMYD1Q8NB12 490 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 OR10A6Q8NH74 314 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 RASSF5Q8WWW0 418 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 TAMM41Q96BW9 452 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 LRRC58Q96CX6 371 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 MCHR1Q99705 422 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 FGFR1OP2Q9NVK5 253 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 SLC13A4Q9UKG4 626 aa16.99■□□□□ 0.31
CCHCR1-230ENST00000513222 CHD3Q12873 2000 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 IGKV3-15P01624 115 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 IGHV4-39P01824 125 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 THY1P04216 161 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 GTF2E2P29084 291 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 ARFIP2P53365 341 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 CLDN17P56750 224 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 LGALS3BPQ08380 585 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 KLF10Q13118 480 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 TNK1Q13470 666 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 HIKESHIQ53FT3 197 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 SLC22A25Q6T423 547 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 PXKQ7Z7A4 578 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 PIAS4Q8N2W9 510 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 OR4D11Q8NGI4 311 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 OR2M2Q96R28 347 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 FKRPQ9H9S5 495 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 BARX1Q9HBU1 254 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 SELENONQ9NZV5 590 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 ABCA2Q9BZC7 2435 aa16.98■□□□□ 0.31
CCHCR1-230ENST00000513222 H7C417 338 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 M0R1B8 84 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 M0R3H8 397 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 SLC43A1O75387 559 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 HPRP00739 348 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 ROR2Q01974 943 aaKnown RBP16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 CLEC12BQ2HXU8 276 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 TSPYL5Q86VY4 417 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 CCDC36Q8IYA8 594 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 PIK3C3Q8NEB9 887 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 ADAMTS16Q8TE57 1224 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 MPP4Q96JB8 637 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 ZNF583Q96ND8 569 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 MOGAT1Q96PD6 335 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 ALKBH3Q96Q83 286 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 KATNB1Q9BVA0 655 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 SLC19A3Q9BZV2 496 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 ALG2Q9H553 416 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 NOX1Q9Y5S8 564 aa16.97■□□□□ 0.31
CCHCR1-230ENST00000513222 IGHV1-18A0A0C4DH31 117 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 PLPP3O14495 311 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 KRT33AO76009 404 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 IGF2P01344 180 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 APOBEC3AP31941 199 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 CDKN1AP38936 164 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 ZP4Q12836 540 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 MAPRE2Q15555 327 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 RABL3Q5HYI8 236 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 ENTPD8Q5MY95 495 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 KLHL24Q6TFL4 600 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 WDR88Q6ZMY6 472 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 C20orf196Q8IYI0 205 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 MUC15Q8N387 334 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 C1QTNF6Q9BXI9 259 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 GPR35Q9HC97 309 aa16.96■□□□□ 0.31
CCHCR1-230ENST00000513222 JMJD1CQ15652 2540 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 TRAPPC13A5PLN9 417 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 AKAP8O43823 692 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 OPN1SWP03999 348 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 KRTAP1-1Q07627 177 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 PUDPQ08623 228 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 C1DQ13901 141 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 SWI5Q1ZZU3 235 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 MST1LQ2TV78 715 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 HMBOX1Q6NT76 420 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 ERICH5Q6P6B1 374 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 RBM45Q8IUH3 476 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 FBXL14Q8N1E6 418 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 SLC38A2Q96QD8 506 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 ASPNQ9BXN1 380 aa16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 POLR2J2Q9GZM3 115 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 POLR2J3Q9H1A7 115 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-230ENST00000513222 MED4Q9NPJ6 270 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms