RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ITGA5P08648 1049 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 NCK1P16333 377 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 ZNF43P17038 809 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 LOXP28300 417 aaPredicted RBP10.42□□□□□ -0.74
RAB5C-204ENST00000547517 IST1P53990 364 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 NR1H2P55055 460 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 CLDN17P56750 224 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 LTBQ06643 244 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 LGALS3BPQ08380 585 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 FOXD4Q12950 439 aaPredicted RBP10.42□□□□□ -0.74
RAB5C-204ENST00000547517 MFSD13AQ14CX5 517 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 PPA1Q15181 289 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 TTC33Q6PID6 262 aaPredicted RBP10.42□□□□□ -0.74
RAB5C-204ENST00000547517 H1FNTQ75WM6 255 aaPredicted RBP10.42□□□□□ -0.74
RAB5C-204ENST00000547517 VTCN1Q7Z7D3 282 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 RNF148Q8N7C7 305 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 ADPRHL1Q8NDY3 354 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 OR6S1Q8NH40 331 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 LZICQ8WZA0 190 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 HSD17B8Q92506 261 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 NINJ1Q92982 152 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 FAM162AQ96A26 154 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 OXGR1Q96P68 337 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 CCT8L2Q96SF2 557 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 CCM2LQ9NUG4 571 aaPredicted RBP10.42□□□□□ -0.74
RAB5C-204ENST00000547517 ARL8BQ9NVJ2 186 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 TAGLN3Q9UI15 199 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 CORINQ9Y5Q5 1042 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 OTOGQ6ZRI0 2925 aa10.42□□□□□ -0.74
RAB5C-204ENST00000547517 A0A1W2PR80 420 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 OR5H1A6NKK0 313 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 PDLIM1O00151 329 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 SERPINI2O75830 405 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 OR5F1O95221 314 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 FAM107AO95990 144 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 HPRP00739 348 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 SERPINA1P01009 418 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 RAF1P04049 648 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 CDH2P19022 906 aaPredicted RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 DNASE1P24855 282 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 SELENOWP63302 87 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 MXRA7P84157 204 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 POU3F1Q03052 451 aaPredicted RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 GABPB1Q06547 395 aaPredicted RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 PMS2P3Q13401 168 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 PIN1Q13526 163 aaPredicted RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 KEAP1Q14145 624 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 ZNF74Q16587 644 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 TIMM23BQ5SRD1 257 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 GKAP1Q5VSY0 366 aaPredicted RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 LINC00114Q6XXX2 140 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 ZNF704Q6ZNC4 412 aaPredicted RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 UEVLDQ8IX04 471 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 SCAIQ8N9R8 606 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 POMGNT2Q8NAT1 580 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 OR52N5Q8NH56 324 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 TMEM255BQ8WV15 326 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 MPP4Q96JB8 637 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 HSH2DQ96JZ2 352 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 PRRC1Q96M27 445 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 USB1Q9BQ65 265 aaKnown RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 PRSS27Q9BQR3 290 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 ZNF426Q9BUY5 554 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 POLR2J2Q9GZM3 115 aaKnown RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 POLR2J3Q9H1A7 115 aaKnown RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 NGBQ9NPG2 151 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 MRPL39Q9NYK5 338 aaKnown RBP10.41□□□□□ -0.74
RAB5C-204ENST00000547517 EGFL7Q9UHF1 273 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 EDARQ9UNE0 448 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 RCE1Q9Y256 329 aa10.41□□□□□ -0.74
RAB5C-204ENST00000547517 ABCA4P78363 2273 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 ZNF587BE7ETH6 402 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 C11orf98E9PRG8 122 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 CLOCKO15516 846 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 TRAF3IP2O43734 574 aaPredicted RBP10.4□□□□□ -0.74
RAB5C-204ENST00000547517 AKAP8O43823 692 aaKnown RBP10.4□□□□□ -0.74
RAB5C-204ENST00000547517 ATE1O95260 518 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 CH25HO95992 272 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 MT-ATP6P00846 226 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 IFNW1P05000 195 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 UMPSP11172 480 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 HLA-DOBP13765 273 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 TCN1P20061 433 aaPredicted RBP10.4□□□□□ -0.74
RAB5C-204ENST00000547517 AHCYP23526 432 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 MPGP29372 298 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 HOXC12P31275 282 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 YAP1P46937 504 aaKnown RBP10.4□□□□□ -0.74
RAB5C-204ENST00000547517 ART1P52961 327 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 UGT2B15P54855 530 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 SLC25A3Q00325 362 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 PUDPQ08623 228 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 IFI44LQ53G44 452 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 SEZ6L2Q6UXD5 910 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 FKBP9P1Q75LS8 142 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 CBLL1Q75N03 491 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 ABHD12BQ7Z5M8 362 aaPredicted RBP10.4□□□□□ -0.74
RAB5C-204ENST00000547517 NKAIN4Q8IVV8 208 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 PGAM4Q8N0Y7 254 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 ANKS4BQ8N8V4 417 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 CCDC197Q8NCU1 140 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms