RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ZHX1-C8orf76Q96EF9 292 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ADAM19Q9H013 955 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 ALG2Q9H553 416 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 FAIMQ9NVQ4 179 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 CISD1Q9NZ45 108 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 RPS6KB2Q9UBS0 482 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 PRSS50Q9UI38 385 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 OSGIN1Q9UJX0 560 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 TMED7Q9Y3B3 224 aa15.48■□□□□ 0.07
SHKBP1-203ENST00000594298 SHISA9B4DS77 424 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 SULT2B1O00204 365 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 RAMP1O60894 148 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 LYZL6O75951 148 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 AQP1P29972 269 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 PCGF2P35227 344 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 RASGEF1BQ0VAM2 473 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 STK11Q15831 433 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 VMACQ2NL98 169 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 RABL3Q5HYI8 236 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 HIPK1Q86Z02 1210 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 POU5F2Q8N7G0 328 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 SLC26A7Q8TE54 656 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 RASSF5Q8WWW0 418 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 RCN3Q96D15 328 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 MUCL1Q96DR8 90 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 RADILQ96JH8 1075 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 HS6ST2Q96MM7 605 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 ZNF300Q96RE9 604 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 HOPXQ9BPY8 73 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 ARL2BPQ9Y2Y0 163 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 CHST2Q9Y4C5 530 aa15.47■□□□□ 0.07
SHKBP1-203ENST00000594298 M0QX08 132 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 FXYD1O00168 92 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 NDUFAB1O14561 156 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 AIM2O14862 343 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 DNPH1O43598 174 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 NDUFS7O75251 213 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 MFN2O95140 757 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 GGT1P19440 569 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 CCNA2P20248 432 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 IGHV1-2P23083 117 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 EDNRAP25101 427 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 PRDX6P30041 224 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 DIO1P49895 249 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 PCBP3P57721 371 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 NRF1Q16656 503 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 HMBOX1Q6NT76 420 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 PODNL1Q6PEZ8 512 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 PIGWQ7Z7B1 504 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 MYLK2Q9H1R3 596 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 GDF2Q9UK05 429 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 TRAPPC4Q9Y296 219 aa15.46■□□□□ 0.07
SHKBP1-203ENST00000594298 IGKV3D-15A0A087WSY6 115 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 OR5H1A6NKK0 313 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 PMS2P2O95744 297 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 IFNA2P01563 188 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 IFNA14P01570 189 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 C8BP07358 591 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 PRG2P13727 222 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 GZMMP51124 257 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 NCALDP61601 193 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 PDK3Q15120 406 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 ABLIM2Q6H8Q1 611 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 GALNT5Q7Z7M9 940 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 CALHM3Q86XJ0 350 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 OR52E4Q8NGH9 312 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 PIF1Q9H611 641 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 TMEM27Q9HBJ8 222 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 YAE1D1Q9NRH1 226 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 NPAP1Q9NZP6 1156 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 SELENONQ9NZV5 590 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 TMEM181Q9P2C4 612 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 PRR14LQ5THK1 2151 aa15.45■□□□□ 0.06
SHKBP1-203ENST00000594298 CHD3Q12873 2000 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 TMEM72A0PK05 275 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 A8MVM7 634 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 ABCD4O14678 606 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 EIF1BO60739 113 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 DCTN3O75935 186 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 CDH11P55287 796 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 RGS8P57771 180 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 OR2B6P58173 313 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 SLC35A1P78382 337 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 AGAP6Q5VW22 663 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 HACD2Q6Y1H2 254 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 CCDC80Q76M96 950 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 RANBP3LQ86VV4 465 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 TREML1Q86YW5 311 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 ZNF100Q8IYN0 542 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 ZNF433Q8N7K0 673 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 LSMEM1Q8N8F7 131 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 DNAJA4Q8WW22 397 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 ZNF583Q96ND8 569 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 RHNO1Q9BSD3 238 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 NAA11Q9BSU3 229 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 C12orf10Q9HB07 376 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 TESQ9UGI8 421 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 B3GALT5Q9Y2C3 310 aa15.44■□□□□ 0.06
SHKBP1-203ENST00000594298 A0A096LNT2 108 aa15.43■□□□□ 0.06
SHKBP1-203ENST00000594298 FAM220BPB1ANY3 271 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms