RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 LRRN3E7EW58 273 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 UPK3AO75631 287 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 MFN2O95140 757 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 LY6G6DO95868 133 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 FOSL1P15407 271 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 PPIBP23284 216 aaKnown RBP9.31□□□□□ -0.92
NELFE-213ENST00000494956 SLC6A2P23975 617 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 CDH11P55287 796 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 RPS4XP62701 263 aaKnown RBP9.31□□□□□ -0.92
NELFE-213ENST00000494956 TUBA1BP68363 451 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 TUBA4AP68366 448 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 LTBQ06643 244 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 NFYCQ13952 458 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 HIKESHIQ53FT3 197 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 NIPAL3Q6P499 406 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 CREB3L2Q70SY1 520 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 TUBA1AQ71U36 451 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 WDFY1Q8IWB7 410 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 MAPK1IP1LQ8NDC0 245 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 HIPK4Q8NE63 616 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 GPR32P1Q8NGA4 272 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 OR4D11Q8NGI4 311 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 HTRA1Q92743 480 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 TMEM45BQ96B21 275 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 ANKRD27Q96NW4 1050 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 MUS81Q96NY9 551 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 ALKBH3Q96Q83 286 aaPredicted RBP9.31□□□□□ -0.92
NELFE-213ENST00000494956 SLCO5A1Q9H2Y9 848 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 TMEM38AQ9H6F2 299 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 ARMC7Q9H6L4 198 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 NGBQ9NPG2 151 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 ZNF701Q9NV72 531 aaPredicted RBP9.31□□□□□ -0.92
NELFE-213ENST00000494956 FGFR1OP2Q9NVK5 253 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 CISD1Q9NZ45 108 aaKnown RBP9.31□□□□□ -0.92
NELFE-213ENST00000494956 B3GAT1Q9P2W7 334 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 RPS6KB2Q9UBS0 482 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 GDF2Q9UK05 429 aaPredicted RBP9.31□□□□□ -0.92
NELFE-213ENST00000494956 GMEB1Q9Y692 573 aa9.31□□□□□ -0.92
NELFE-213ENST00000494956 ALPK2Q86TB3 2170 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 VPS13CQ709C8 3753 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 E7EQL1 145 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 C3orf80F5H4A9 247 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 M0QX08 132 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 M0R082 166 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 OVOL3O00110 214 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 ANGPT2O15123 496 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 LGI1O95970 557 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 HPRP00739 348 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 HLA-DOBP13765 273 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 CD40P25942 277 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 GRPRP30550 384 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 MAP2K6P52564 334 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 CLDN17P56750 224 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 RGS8P57771 180 aaPredicted RBP9.3□□□□□ -0.92
NELFE-213ENST00000494956 OR1Q1Q15612 314 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 NPTX1Q15818 432 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 DUSP7Q16829 419 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 CYP51A1Q16850 503 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 ZSWIM7Q19AV6 140 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 RABL3Q5HYI8 236 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 ALG10BQ5I7T1 473 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 C6orf89Q6UWU4 347 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 CLEC9AQ6UXN8 241 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 TSPYL5Q86VY4 417 aaPredicted RBP9.3□□□□□ -0.92
NELFE-213ENST00000494956 KRT73Q86Y46 540 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 RBM45Q8IUH3 476 aaKnown RBP9.3□□□□□ -0.92
NELFE-213ENST00000494956 ARMC8Q8IUR7 673 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 DPP10Q8N608 796 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 LSMEM1Q8N8F7 131 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 OR10A6Q8NH74 314 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 MFSD8Q8NHS3 518 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 VANGL1Q8TAA9 524 aaPredicted RBP9.3□□□□□ -0.92
NELFE-213ENST00000494956 ZNF417Q8TAU3 575 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 STK35Q8TDR2 534 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
NELFE-213ENST00000494956 COX4I2Q96KJ9 171 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 ZNF587Q96SQ5 575 aaPredicted RBP9.3□□□□□ -0.92
NELFE-213ENST00000494956 SF3B5Q9BWJ5 86 aaKnown RBP9.3□□□□□ -0.92
NELFE-213ENST00000494956 AMBRA1Q9C0C7 1298 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 RABEP2Q9H5N1 569 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 CXorf56Q9H5V9 222 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 SLC17A5Q9NRA2 495 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 PARPBPQ9NWS1 579 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 ANGPT4Q9Y264 503 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 CR1P17927 2039 aa9.3□□□□□ -0.92
NELFE-213ENST00000494956 A0A096LPE4 126 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 A0A0B4J2E0 115 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 A0A1B0GX12 115 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 A0A1W2PPZ6 126 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 KRT33AO76009 404 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 IGHV4-39P01824 125 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 THY1P04216 161 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 PAX1P15863 534 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 MPGP29372 298 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 ACVR1BP36896 505 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 GZMMP51124 257 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 CRYBA2P53672 197 aa9.29□□□□□ -0.92
NELFE-213ENST00000494956 CDH12P55289 794 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms