RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 FGF20Q9NP95 211 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 ISYNA1Q9NPH2 558 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 TIMMDC1Q9NPL8 285 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 SERINC1Q9NRX5 453 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 C20orf141Q9NUB4 165 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 KLRF1Q9NZS2 232 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 PPP4R1LQ9P1A2 415 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 ENPP5Q9UJA9 477 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 ZNF229Q9UJW7 825 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 SPIN1Q9Y657 262 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 TRAV36DV7A0A075B6V5 113 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 A8MVM7 634 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 ERVH48-1M5A8F1 160 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 BHLHE40O14503 412 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 ARPC3O15145 178 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 INMTO95050 263 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 CH25HO95992 272 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 BCL10O95999 233 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 HPP00738 406 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 APEHP13798 732 aaKnown RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 ACVR2AP27037 513 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 C21orf33P30042 268 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 MAP2K4P45985 399 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 CLK1P49759 484 aaKnown RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 SSR4P51571 173 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 GP2P55259 537 aaKnown RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 SOX8P57073 446 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 CXADRP78310 365 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 PLAURQ03405 335 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 IRF3Q14653 427 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 QPRTQ15274 297 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 MED22Q15528 200 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 NTRK2Q16620 822 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 NDUFAF6Q330K2 333 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 EMC4Q5J8M3 183 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 LCN10Q6JVE6 187 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 TMEM81Q6P7N7 255 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 APOOLQ6UXV4 268 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 TMPRSS11AQ6ZMR5 421 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 MEPCEQ7L2J0 689 aaKnown RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 MAMDC2Q7Z304 686 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 VASH2Q86V25 355 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 OR13C2Q8NGS9 318 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 GPR119Q8TDV5 335 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 DUSP19Q8WTR2 217 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 THAP3Q8WTV1 239 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 ASB15Q8WXK1 588 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 HGDQ93099 445 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 OTULINQ96BN8 352 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 C8orf44Q96CB5 159 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 DDIT4LQ96D03 193 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 SPACA9Q96E40 222 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 RNFT2Q96EX2 444 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 ERMAPQ96PL5 475 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-214ENST00000495485 TNFRSF13CQ96RJ3 184 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 CPNE5Q9HCH3 593 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 INPP5EQ9NRR6 644 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 IL17BQ9UHF5 180 aa9.33□□□□□ -0.92
HDAC3-214ENST00000495485 TRAV27A0A087WT01 109 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 TMED7-TICAM2A0A0A6YYA0 188 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 TMEM129A0AVI4 362 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 H3BMQ9 156 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 M0R129 80 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 CCRL2O00421 344 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 GNB5O14775 395 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 PRKNO60260 465 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 TRIM3O75382 744 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 OR2J2O76002 312 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 OR6A2O95222 327 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 AHSA1O95433 338 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 NADKO95544 446 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 UMODP07911 640 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 ADORA3P0DMS8 318 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 COX6A1P12074 109 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 CD36P16671 472 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 F8A1P23610 371 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 GTF2E2P29084 291 aaKnown RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 MASP1P48740 699 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 FBXW4P57775 412 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 TUBA1BP68363 451 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 LSM11P83369 360 aaKnown RBP eCLIP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 LSAMPQ13449 338 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 SPHARQ15513 63 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 COL28A1Q2UY09 1125 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 ARMCX4Q5H9R4 360 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 AADACL4Q5VUY2 407 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 GPR139Q6DWJ6 353 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 CBLN3Q6UW01 205 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 GDPGP1Q6ZNW5 385 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 TUBA1AQ71U36 451 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 NANOGNBQ7Z5D8 188 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 JAZF1Q86VZ6 243 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 MEX3DQ86XN8 651 aaKnown RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 CPOQ8IVL8 374 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 GPALPP1Q8IXQ4 340 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 TMEM156Q8N614 296 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 NANOGP1Q8N7R0 232 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 CLEC1AQ8NC01 280 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 FAM98AQ8NCA5 519 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms