RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G RAD16P31244 790 aa3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G SKI2P35207 1287 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
tC(GCA)GtC(GCA)G TIF34P40217 347 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G ERG10P41338 398 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G SUM1P46676 1062 aa3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G AVT1P47082 602 aa3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G ALG11P53954 548 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G ROD1Q02805 837 aa3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G NOC3Q07896 663 aaPredicted RBP3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G SMC5Q08204 1093 aa3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G SDH5Q08230 162 aa3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G FLC1Q08967 793 aa3.67□□□□□ -1.82
tC(GCA)GtC(GCA)G HXK1P04806 485 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G RAD3P06839 778 aa3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G YCL042WP25572 119 aa3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G CCR4P31384 837 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G ECM21P38167 1117 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G VID24P38263 362 aa3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G ERV46P39727 415 aa3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G YDR090CQ03193 310 aa3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G OYE2Q03558 400 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G AIM33Q04516 312 aa3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G RKM5Q12367 367 aa3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G YOR111WQ99210 232 aa3.66□□□□□ -1.82
tC(GCA)GtC(GCA)G RPL4AP10664 362 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G STI1P15705 589 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
tC(GCA)GtC(GCA)G PCA1P38360 1216 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G PFS1P38872 237 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G BRE2P43132 505 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G BFA1P47113 574 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G HGH1P48362 394 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G RPL4BP49626 362 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G MRPS35P53292 345 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G SUN4P53616 420 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G SUR7P54003 302 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G HOS3Q02959 697 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G CWC21Q03375 135 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G SEG1Q04279 960 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G TFC6Q06339 672 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G SAM3Q08986 587 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G PUS1Q12211 544 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G RAD50P12753 1312 aa3.65□□□□□ -1.83
tC(GCA)GtC(GCA)G ILV1P00927 576 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G GAL80P04387 435 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G CLN3P13365 580 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G MTF1P14908 341 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G PFK1P16861 987 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G DAL82P21705 255 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G PRR1P28708 518 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G BRF1P29056 596 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G PMI40P29952 429 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G MRX3P38172 270 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G ERC1P38767 581 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G ORC6P38826 435 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G OSW5P40219 148 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G FIS1P40515 155 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G ULP2P40537 1034 aaPredicted RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G ISM1P48526 1002 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G YNR065CP53751 1116 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G CNM67P53865 581 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G TDA7P53882 636 aaPredicted RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G YNL146WP53906 100 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G SNU56Q03782 492 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G YPL066WQ12194 479 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G NDJ1Q12366 352 aa3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G MDN1Q12019 4910 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)GtC(GCA)G REV1P12689 985 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G LYP1P32487 611 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G RER2P35196 286 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G YKR051WP36142 418 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G TGL4P36165 910 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G CDC27P38042 758 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G RGD1P38339 666 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G OSH3P38713 996 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G BTT1P40314 149 aaPredicted RBP3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G YJR061WP40355 935 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G YIL161WP40449 235 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G POL31P46957 487 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G IML2P47031 731 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G VPS70P47161 811 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G YMR187CQ03236 431 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G GCN5Q03330 439 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G SMD2Q06217 110 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G YCG1Q06680 1035 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G YDL057WQ07379 328 aa3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G MAK21Q12176 1025 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)GtC(GCA)G OPI1P21957 404 aa3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G ERG6P25087 383 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G CYS3P31373 394 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G PGM1P33401 570 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G AAP1P37898 856 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G GGA2P38817 585 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G VPS25P47142 202 aa3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G VEL1P53058 206 aa3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G CDD1Q06549 142 aa3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G YFT2Q06676 274 aa3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G CDA2Q06703 312 aa3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G YOL073CQ08232 322 aa3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G ALR1Q08269 859 aa3.62□□□□□ -1.83
tC(GCA)GtC(GCA)G IES4Q08561 116 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms