RNA–Protein interactions for RNA: snR190

snR190, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR190, Length 190 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR190snR190 YBR053CP38235 358 aa1.5□□□□□ -2.17
snR190snR190 YHL017WP38745 532 aa1.5□□□□□ -2.17
snR190snR190 GGA2P38817 585 aaKnown RBP1.5□□□□□ -2.17
snR190snR190 SAK1P38990 1142 aa1.5□□□□□ -2.17
snR190snR190 PZF1P39933 429 aa1.5□□□□□ -2.17
snR190snR190 SDS3P40505 327 aa1.5□□□□□ -2.17
snR190snR190 HUL4P40985 892 aa1.5□□□□□ -2.17
snR190snR190 PFA3P42836 336 aa1.5□□□□□ -2.17
snR190snR190 SSY5P47002 699 aa1.5□□□□□ -2.17
snR190snR190 DAS1P47005 663 aa1.5□□□□□ -2.17
snR190snR190 TAD1P53065 400 aa1.5□□□□□ -2.17
snR190snR190 GND2P53319 492 aa1.5□□□□□ -2.17
snR190snR190 YGR283CP53336 341 aaPredicted RBP1.5□□□□□ -2.17
snR190snR190 YML122CQ03207 126 aa1.5□□□□□ -2.17
snR190snR190 PKH1Q03407 766 aa1.5□□□□□ -2.17
snR190snR190 LRS4Q04087 347 aaKnown RBP1.5□□□□□ -2.17
snR190snR190 MUS81Q04149 632 aaPredicted RBP1.5□□□□□ -2.17
snR190snR190 REH1Q06709 432 aa1.5□□□□□ -2.17
snR190snR190 HBT1Q07653 1046 aaKnown RBP1.5□□□□□ -2.17
snR190snR190 THI21Q08975 551 aa1.5□□□□□ -2.17
snR190snR190 YLR415CO13578 112 aa1.49□□□□□ -2.17
snR190snR190 CAN1P04817 590 aa1.49□□□□□ -2.17
snR190snR190 TOM70P07213 617 aaKnown RBP1.49□□□□□ -2.17
snR190snR190 SIC1P38634 284 aa1.49□□□□□ -2.17
snR190snR190 SET5P38890 526 aaKnown RBP1.49□□□□□ -2.17
snR190snR190 ATF1P40353 525 aa1.49□□□□□ -2.17
snR190snR190 ALG2P43636 503 aa1.49□□□□□ -2.17
snR190snR190 YJL163CP46996 555 aa1.49□□□□□ -2.17
snR190snR190 AMA1P50082 593 aa1.49□□□□□ -2.17
snR190snR190 RTA1P53047 317 aa1.49□□□□□ -2.17
snR190snR190 HUL5P53119 910 aa1.49□□□□□ -2.17
snR190snR190 NOP7P53261 605 aaKnown RBP1.49□□□□□ -2.17
snR190snR190 DAM1P53267 343 aa1.49□□□□□ -2.17
snR190snR190 NRG1Q03125 231 aa1.49□□□□□ -2.17
snR190snR190 CRR1Q05790 422 aa1.49□□□□□ -2.17
snR190snR190 RSC3Q06639 885 aa1.49□□□□□ -2.17
snR190snR190 FLC1Q08967 793 aa1.49□□□□□ -2.17
snR190snR190 MRH1Q12117 320 aaPredicted RBP1.49□□□□□ -2.17
snR190snR190 GPR1Q12361 961 aa1.49□□□□□ -2.17
snR190snR190 LAT1P12695 482 aaKnown RBP1.48□□□□□ -2.17
snR190snR190 GAL11P19659 1081 aa1.48□□□□□ -2.17
snR190snR190 SPC29P33419 253 aa1.48□□□□□ -2.17
snR190snR190 PCL5P38794 229 aa1.48□□□□□ -2.17
snR190snR190 RSP5P39940 809 aaKnown RBP1.48□□□□□ -2.17
snR190snR190 YIR042CP40586 236 aa1.48□□□□□ -2.17
snR190snR190 RLP7P40693 322 aaKnown RBP1.48□□□□□ -2.17
snR190snR190 SHR5P41912 237 aa1.48□□□□□ -2.17
snR190snR190 RIA1P53893 1110 aa1.48□□□□□ -2.17
snR190snR190 ATP25Q03153 612 aa1.48□□□□□ -2.17
snR190snR190 YDR514CQ04408 483 aa1.48□□□□□ -2.17
snR190snR190 ASM4Q05166 528 aa1.48□□□□□ -2.17
snR190snR190 BDF2Q07442 638 aa1.48□□□□□ -2.17
snR190snR190 IRC13Q08630 104 aa1.48□□□□□ -2.17
snR190snR190 MET7Q08645 548 aa1.48□□□□□ -2.17
snR190snR190 TGL5Q12043 749 aa1.48□□□□□ -2.17
snR190snR190 YBR182C-AQ8TGU6 64 aa1.48□□□□□ -2.17
snR190snR190 DIF1O13577 133 aa1.47□□□□□ -2.17
snR190snR190 PHR1P05066 565 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
snR190snR190 PER1P25625 357 aa1.47□□□□□ -2.17
snR190snR190 CUE2P36075 443 aaKnown RBP1.47□□□□□ -2.17
snR190snR190 BCD1P38772 366 aa1.47□□□□□ -2.17
snR190snR190 FMP52P40008 231 aa1.47□□□□□ -2.17
snR190snR190 HOS4P40480 1083 aa1.47□□□□□ -2.17
snR190snR190 TY4A-JP47023 414 aa1.47□□□□□ -2.17
snR190snR190 HXT16P47185 567 aa1.47□□□□□ -2.17
snR190snR190 MTR3P48240 250 aaPredicted RBP1.47□□□□□ -2.17
snR190snR190 HSV2P50079 448 aaPredicted RBP1.47□□□□□ -2.17
snR190snR190 TEL2P53038 688 aa1.47□□□□□ -2.17
snR190snR190 ZIP2P53061 704 aa1.47□□□□□ -2.17
snR190snR190 LGE1Q02796 332 aaKnown RBP1.47□□□□□ -2.17
snR190snR190 YDR338CQ05497 695 aa1.47□□□□□ -2.17
snR190snR190 NSE3Q05541 303 aa1.47□□□□□ -2.17
snR190snR190 SGO1Q08490 590 aa1.47□□□□□ -2.17
snR190snR190 MSL5Q12186 476 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
snR190snR190 SUT2Q12286 268 aa1.47□□□□□ -2.17
snR190snR190 ATG11Q12527 1178 aa1.47□□□□□ -2.17
snR190snR190 GFA1P14742 717 aaKnown RBP1.46□□□□□ -2.18
snR190snR190 STI1P15705 589 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
snR190snR190 HIR1P32479 840 aa1.46□□□□□ -2.18
snR190snR190 HIS7P33734 552 aaKnown RBP1.46□□□□□ -2.18
snR190snR190 TDP1P38319 544 aa1.46□□□□□ -2.18
snR190snR190 YBR259WP38338 688 aa1.46□□□□□ -2.18
snR190snR190 GDH3P39708 457 aa1.46□□□□□ -2.18
snR190snR190 ECM1P39715 212 aa1.46□□□□□ -2.18
snR190snR190 ALY2P47029 1046 aa1.46□□□□□ -2.18
snR190snR190 ZDS1P50111 915 aaKnown RBP1.46□□□□□ -2.18
snR190snR190 UBC11P52492 156 aa1.46□□□□□ -2.18
snR190snR190 TEX1P53851 422 aaKnown RBP1.46□□□□□ -2.18
snR190snR190 SSL2Q00578 843 aa1.46□□□□□ -2.18
snR190snR190 GAD1Q04792 585 aa1.46□□□□□ -2.18
snR190snR190 CDC53Q12018 815 aaKnown RBP1.46□□□□□ -2.18
snR190snR190 BNR1P40450 1375 aa1.46□□□□□ -2.18
snR190snR190 SIR3P06701 978 aa1.45□□□□□ -2.18
snR190snR190 CDC43P18898 376 aa1.45□□□□□ -2.18
snR190snR190 HCA4P20448 770 aaKnown RBP1.45□□□□□ -2.18
snR190snR190 KIN3P22209 435 aa1.45□□□□□ -2.18
snR190snR190 PPZ2P33329 710 aa1.45□□□□□ -2.18
snR190snR190 CBR1P38626 284 aaKnown RBP1.45□□□□□ -2.18
snR190snR190 CCT3P39077 534 aaKnown RBP1.45□□□□□ -2.18
snR190snR190 BAP3P41815 604 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 93.7 ms