RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W RMT2Q03305 412 aa2.17□□□□□ -2.06
CTF4YPR135W SIZ1Q04195 904 aa2.17□□□□□ -2.06
CTF4YPR135W ICL2Q12031 575 aa2.17□□□□□ -2.06
CTF4YPR135W MDM20Q12387 796 aaKnown RBP2.17□□□□□ -2.06
CTF4YPR135W WHI5Q12416 295 aa2.17□□□□□ -2.06
CTF4YPR135W IKI3Q06706 1349 aaKnown RBP2.17□□□□□ -2.06
CTF4YPR135W YER152CP10356 443 aa2.16□□□□□ -2.06
CTF4YPR135W HRR25P29295 494 aaKnown RBP2.16□□□□□ -2.06
CTF4YPR135W SWE1P32944 819 aa2.16□□□□□ -2.06
CTF4YPR135W OAR1P35731 278 aa2.16□□□□□ -2.06
CTF4YPR135W YHL050CP38721 697 aa2.16□□□□□ -2.06
CTF4YPR135W YHR219WP38900 624 aa2.16□□□□□ -2.06
CTF4YPR135W NOP12Q08208 459 aaKnown RBP2.16□□□□□ -2.06
CTF4YPR135W SEC3P33332 1336 aaKnown RBP2.16□□□□□ -2.06
CTF4YPR135W SPE2P21182 396 aa2.16□□□□□ -2.06
CTF4YPR135W MGE1P38523 228 aa2.16□□□□□ -2.06
CTF4YPR135W OXR1Q08952 273 aa2.16□□□□□ -2.06
CTF4YPR135W TOR2P32600 2474 aaKnown RBP2.16□□□□□ -2.06
CTF4YPR135W AUS1Q08409 1394 aa2.16□□□□□ -2.06
CTF4YPR135W CAN1P04817 590 aa2.15□□□□□ -2.06
CTF4YPR135W MTC3P53077 123 aa2.15□□□□□ -2.06
CTF4YPR135W TY3A-GQ12173 290 aa2.15□□□□□ -2.06
CTF4YPR135W TY3A-IQ99219 290 aa2.15□□□□□ -2.06
CTF4YPR135W TEL1P38110 2787 aa2.15□□□□□ -2.07
CTF4YPR135W PEP7P32609 515 aa2.15□□□□□ -2.07
CTF4YPR135W AFG3P39925 761 aa2.15□□□□□ -2.07
CTF4YPR135W YJR008WP47085 338 aa2.15□□□□□ -2.07
CTF4YPR135W ART5P53244 586 aaKnown RBP2.15□□□□□ -2.07
CTF4YPR135W MSC2Q03455 724 aa2.15□□□□□ -2.07
CTF4YPR135W TPO1Q07824 586 aa2.15□□□□□ -2.07
CTF4YPR135W AIM39Q08223 395 aa2.15□□□□□ -2.07
CTF4YPR135W MSC6Q08818 692 aaKnown RBP2.15□□□□□ -2.07
CTF4YPR135W YOR131CQ12486 218 aa2.15□□□□□ -2.07
CTF4YPR135W BAS1P22035 811 aa2.15□□□□□ -2.07
CTF4YPR135W MLS1P30952 554 aa2.15□□□□□ -2.07
CTF4YPR135W YGL082WP53155 381 aa2.15□□□□□ -2.07
CTF4YPR135W LGE1Q02796 332 aaKnown RBP2.15□□□□□ -2.07
CTF4YPR135W GIN4Q12263 1142 aa2.15□□□□□ -2.07
CTF4YPR135W SUT2Q12286 268 aa2.15□□□□□ -2.07
CTF4YPR135W ADR1P07248 1323 aa2.14□□□□□ -2.07
CTF4YPR135W MET4P32389 672 aa2.14□□□□□ -2.07
CTF4YPR135W MKK2P32491 506 aa2.14□□□□□ -2.07
CTF4YPR135W NUG1P40010 520 aaKnown RBP2.14□□□□□ -2.07
CTF4YPR135W ATF1P40353 525 aa2.14□□□□□ -2.07
CTF4YPR135W MND2P40577 368 aa2.14□□□□□ -2.07
CTF4YPR135W NET1P47035 1189 aa2.14□□□□□ -2.07
CTF4YPR135W UBX2Q04228 584 aa2.14□□□□□ -2.07
CTF4YPR135W HXK1P04806 485 aaKnown RBP2.14□□□□□ -2.07
CTF4YPR135W PFK1P16861 987 aaKnown RBP2.14□□□□□ -2.07
CTF4YPR135W PFK2P16862 959 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
CTF4YPR135W RGD1P38339 666 aa2.14□□□□□ -2.07
CTF4YPR135W POA1P38218 177 aa2.13□□□□□ -2.07
CTF4YPR135W RSC8P43609 557 aaKnown RBP2.13□□□□□ -2.07
CTF4YPR135W POL32P47110 350 aa2.13□□□□□ -2.07
CTF4YPR135W MLP1Q02455 1875 aaKnown RBP2.13□□□□□ -2.07
CTF4YPR135W ENA1P13587 1091 aa2.13□□□□□ -2.07
CTF4YPR135W CDC60P26637 1090 aaKnown RBP2.13□□□□□ -2.07
CTF4YPR135W SEC8P32855 1065 aa2.13□□□□□ -2.07
CTF4YPR135W PPX1P38698 397 aa2.13□□□□□ -2.07
CTF4YPR135W MXR1P40029 184 aa2.13□□□□□ -2.07
CTF4YPR135W IOC3P43596 787 aa2.13□□□□□ -2.07
CTF4YPR135W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
CTF4YPR135W RNH70P53331 553 aa2.13□□□□□ -2.07
CTF4YPR135W ENA2Q01896 1091 aa2.13□□□□□ -2.07
CTF4YPR135W ENA5Q12691 1091 aa2.13□□□□□ -2.07
CTF4YPR135W BI4P03879 638 aa2.12□□□□□ -2.07
CTF4YPR135W ACE2P21192 770 aa2.12□□□□□ -2.07
CTF4YPR135W KRE2P27809 442 aa2.12□□□□□ -2.07
CTF4YPR135W EXG2P52911 562 aa2.12□□□□□ -2.07
CTF4YPR135W BRE5P53741 515 aaKnown RBP2.12□□□□□ -2.07
CTF4YPR135W FPR4Q06205 392 aaPredicted RBP2.12□□□□□ -2.07
CTF4YPR135W ADY3Q07732 790 aa2.12□□□□□ -2.07
CTF4YPR135W SSP2Q08646 371 aa2.12□□□□□ -2.07
CTF4YPR135W ECM29P38737 1868 aa2.12□□□□□ -2.07
CTF4YPR135W BCS1P32839 456 aa2.12□□□□□ -2.07
CTF4YPR135W ZRG8P40021 1076 aa2.12□□□□□ -2.07
CTF4YPR135W HFM1P51979 1187 aa2.12□□□□□ -2.07
CTF4YPR135W SIW14P53965 281 aa2.12□□□□□ -2.07
CTF4YPR135W OYE2Q03558 400 aaKnown RBP2.12□□□□□ -2.07
CTF4YPR135W SVF1Q05515 481 aa2.12□□□□□ -2.07
CTF4YPR135W HIS5P07172 385 aa2.11□□□□□ -2.07
CTF4YPR135W CIT2P08679 460 aa2.11□□□□□ -2.07
CTF4YPR135W TAF13P11747 167 aa2.11□□□□□ -2.07
CTF4YPR135W SYP1P25623 870 aaKnown RBP2.11□□□□□ -2.07
CTF4YPR135W RPT1P33299 467 aaKnown RBP2.11□□□□□ -2.07
CTF4YPR135W KSP1P38691 1029 aaKnown RBP2.11□□□□□ -2.07
CTF4YPR135W NMD2P38798 1089 aaKnown RBP2.11□□□□□ -2.07
CTF4YPR135W YJR107WP47145 328 aa2.11□□□□□ -2.07
CTF4YPR135W TPO2P53283 614 aa2.11□□□□□ -2.07
CTF4YPR135W RTS3P53289 263 aa2.11□□□□□ -2.07
CTF4YPR135W UBX5Q06682 500 aa2.11□□□□□ -2.07
CTF4YPR135W XYL2Q07993 356 aa2.11□□□□□ -2.07
CTF4YPR135W KCS1Q12494 1050 aa2.11□□□□□ -2.07
CTF4YPR135W YOL098CQ12496 1037 aa2.11□□□□□ -2.07
CTF4YPR135W FYV10P40492 516 aa2.11□□□□□ -2.07
CTF4YPR135W SNM1P40993 198 aa2.11□□□□□ -2.07
CTF4YPR135W CNN1P43618 361 aa2.11□□□□□ -2.07
CTF4YPR135W MET12P46151 657 aa2.11□□□□□ -2.07
CTF4YPR135W NNF1P47149 201 aa2.11□□□□□ -2.07
CTF4YPR135W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms