RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C RAD54P32863 898 aa8.68□□□□□ -1.02
LSP1YPL004C PIN4P34217 668 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
LSP1YPL004C RFS1P38234 210 aaKnown RBP8.68□□□□□ -1.02
LSP1YPL004C EFM2P38347 419 aa8.68□□□□□ -1.02
LSP1YPL004C CTM1P38818 585 aa8.68□□□□□ -1.02
LSP1YPL004C YFL052WP43551 465 aa8.68□□□□□ -1.02
LSP1YPL004C RPL4BP49626 362 aaKnown RBP8.68□□□□□ -1.02
LSP1YPL004C PNG1Q02890 363 aa8.68□□□□□ -1.02
LSP1YPL004C HEH2Q03281 663 aa8.68□□□□□ -1.02
LSP1YPL004C YAP7Q08182 245 aa8.68□□□□□ -1.02
LSP1YPL004C PUS1Q12211 544 aaKnown RBP8.68□□□□□ -1.02
LSP1YPL004C OSH2Q12451 1283 aa8.68□□□□□ -1.02
LSP1YPL004C YDR034W-BQ6Q5X2 51 aa8.68□□□□□ -1.02
LSP1YPL004C PSY4P38193 441 aa8.67□□□□□ -1.02
LSP1YPL004C YHR054CP38780 354 aa8.67□□□□□ -1.02
LSP1YPL004C FTR1P40088 404 aa8.67□□□□□ -1.02
LSP1YPL004C INP52P50942 1183 aa8.67□□□□□ -1.02
LSP1YPL004C EEB1Q02891 456 aa8.67□□□□□ -1.02
LSP1YPL004C GIR2Q03768 265 aaPredicted RBP8.67□□□□□ -1.02
LSP1YPL004C PKH2Q12236 1081 aaKnown RBP8.67□□□□□ -1.02
LSP1YPL004C GIS3Q12418 502 aa8.67□□□□□ -1.02
LSP1YPL004C CTF3Q12748 733 aa8.67□□□□□ -1.02
LSP1YPL004C SCJ1P25303 377 aa8.66□□□□□ -1.02
LSP1YPL004C APL1P27351 700 aa8.66□□□□□ -1.02
LSP1YPL004C YET1P35723 206 aa8.66□□□□□ -1.02
LSP1YPL004C HEL1P36113 551 aa8.66□□□□□ -1.02
LSP1YPL004C PTC4P38089 393 aa8.66□□□□□ -1.02
LSP1YPL004C YEL023CP39992 682 aa8.66□□□□□ -1.02
LSP1YPL004C COS5P47187 383 aa8.66□□□□□ -1.02
LSP1YPL004C YNL034WP53963 612 aa8.66□□□□□ -1.02
LSP1YPL004C YNL018CP53976 612 aa8.66□□□□□ -1.02
LSP1YPL004C RPA49Q01080 415 aaPredicted RBP8.66□□□□□ -1.02
LSP1YPL004C CWC21Q03375 135 aaKnown RBP8.66□□□□□ -1.02
LSP1YPL004C ESC8Q08119 714 aa8.66□□□□□ -1.02
LSP1YPL004C SDH5Q08230 162 aa8.66□□□□□ -1.02
LSP1YPL004C PRC1P00729 532 aa8.65□□□□□ -1.02
LSP1YPL004C HAP2P06774 265 aa8.65□□□□□ -1.02
LSP1YPL004C URK1P27515 501 aa8.65□□□□□ -1.02
LSP1YPL004C SEC21P32074 935 aaKnown RBP8.65□□□□□ -1.02
LSP1YPL004C CCL1P37366 393 aa8.65□□□□□ -1.02
LSP1YPL004C RKM3P38222 552 aa8.65□□□□□ -1.02
LSP1YPL004C XDJ1P39102 459 aa8.65□□□□□ -1.02
LSP1YPL004C MMF1P40185 145 aaKnown RBP8.65□□□□□ -1.02
LSP1YPL004C TFG2P41896 400 aaPredicted RBP8.65□□□□□ -1.02
LSP1YPL004C STB4P50104 949 aa8.65□□□□□ -1.02
LSP1YPL004C RCR2Q03446 210 aaKnown RBP8.65□□□□□ -1.02
LSP1YPL004C WAR1Q03631 944 aa8.65□□□□□ -1.02
LSP1YPL004C YLR297WQ05899 129 aa8.65□□□□□ -1.02
LSP1YPL004C SPO75Q07798 868 aa8.65□□□□□ -1.02
LSP1YPL004C TMA16Q08687 178 aa8.65□□□□□ -1.02
LSP1YPL004C MRN1Q08925 612 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
LSP1YPL004C SLX4Q12098 748 aa8.65□□□□□ -1.02
LSP1YPL004C CDC42P19073 191 aa8.64□□□□□ -1.03
LSP1YPL004C IME1P21190 360 aa8.64□□□□□ -1.03
LSP1YPL004C KNS1P32350 737 aaPredicted RBP8.64□□□□□ -1.03
LSP1YPL004C SWI3P32591 825 aa8.64□□□□□ -1.03
LSP1YPL004C POL31P46957 487 aa8.64□□□□□ -1.03
LSP1YPL004C SSL2Q00578 843 aa8.64□□□□□ -1.03
LSP1YPL004C SPP1Q03012 353 aa8.64□□□□□ -1.03
LSP1YPL004C SNU56Q03782 492 aaKnown RBP8.64□□□□□ -1.03
LSP1YPL004C SPO71Q03868 1245 aa8.64□□□□□ -1.03
LSP1YPL004C IWR1Q07532 353 aaPredicted RBP8.64□□□□□ -1.03
LSP1YPL004C SYN8P31377 255 aa8.63□□□□□ -1.03
LSP1YPL004C YKL023WP36103 277 aaKnown RBP8.63□□□□□ -1.03
LSP1YPL004C HMT1P38074 348 aa8.63□□□□□ -1.03
LSP1YPL004C MIP6P38760 659 aaKnown RBP8.63□□□□□ -1.03
LSP1YPL004C FAF1P40546 346 aaPredicted RBP8.63□□□□□ -1.03
LSP1YPL004C STP1Q00947 519 aa8.63□□□□□ -1.03
LSP1YPL004C TBF1Q02457 562 aa8.63□□□□□ -1.03
LSP1YPL004C RGA2Q06407 1009 aa8.63□□□□□ -1.03
LSP1YPL004C MRI1Q06489 411 aaKnown RBP8.63□□□□□ -1.03
LSP1YPL004C CDD1Q06549 142 aa8.63□□□□□ -1.03
LSP1YPL004C REC8Q12188 680 aa8.63□□□□□ -1.03
LSP1YPL004C YDL206WQ12424 762 aa8.63□□□□□ -1.03
LSP1YPL004C GCS1P35197 352 aa8.62□□□□□ -1.03
LSP1YPL004C RPC25P35718 212 aa8.62□□□□□ -1.03
LSP1YPL004C SAP190P36123 1033 aa8.62□□□□□ -1.03
LSP1YPL004C FYV8P46949 817 aaKnown RBP8.62□□□□□ -1.03
LSP1YPL004C SMC3P47037 1230 aa8.62□□□□□ -1.03
LSP1YPL004C RSC1P53236 928 aa8.62□□□□□ -1.03
LSP1YPL004C NOP13P53883 403 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
LSP1YPL004C CSR1Q06705 408 aaKnown RBP8.62□□□□□ -1.03
LSP1YPL004C ATP1P07251 545 aaKnown RBP8.61□□□□□ -1.03
LSP1YPL004C COX11P19516 300 aaKnown RBP8.61□□□□□ -1.03
LSP1YPL004C SPO11P23179 398 aa8.61□□□□□ -1.03
LSP1YPL004C VPS3P23643 1011 aa8.61□□□□□ -1.03
LSP1YPL004C KIP1P28742 1111 aa8.61□□□□□ -1.03
LSP1YPL004C MRPL10P36520 322 aa8.61□□□□□ -1.03
LSP1YPL004C KAP123P40069 1113 aaKnown RBP8.61□□□□□ -1.03
LSP1YPL004C SIP5P40210 489 aaKnown RBP8.61□□□□□ -1.03
LSP1YPL004C SDS3P40505 327 aa8.61□□□□□ -1.03
LSP1YPL004C CPR7P47103 393 aa8.61□□□□□ -1.03
LSP1YPL004C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
LSP1YPL004C TIF35Q04067 274 aaKnown RBP8.61□□□□□ -1.03
LSP1YPL004C PPM1Q04081 328 aa8.61□□□□□ -1.03
LSP1YPL004C YPR148CQ06523 435 aa8.61□□□□□ -1.03
LSP1YPL004C PLP2Q12017 286 aa8.61□□□□□ -1.03
LSP1YPL004C GAL80P04387 435 aa8.6□□□□□ -1.03
LSP1YPL004C TPK1P06244 397 aa8.6□□□□□ -1.03
LSP1YPL004C CIT2P08679 460 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms